Gene Smed_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0811 
Symbol 
ID5321648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp874763 
End bp875227 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID640789748 
ProductRDD domain-containing protein 
Protein accessionYP_001326502 
Protein GI150396035 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.610403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC ATAACGAAGA ACTGAGGCTT CCGAGCGAGG ATTGGCGCGC CTACCAGGGC 
GTTCTGTCTC GCAGGATATT CGCCTTCATC ATCGACTATC TGATCGTCGC GCTGCTGTGG
ATACCGGCGG CGGTCGTGGT GTTCTTCCTC GGCATCCTGA CGCTCGGGCT CGGCTTTTTG
CTCTATCCGG TGCTCTTCGT CCTGGTCGCC ATGCTCTATT TCGGGATGAC CGTCGGCGGC
CGCGAACAGG CTTCCCCGGG AATGAGGATT ATGGGCGTGG CAATCGCCCG GACGGATGGC
CGGCCCATGG ATTTCCTGAC CGCAATCGTC CATCTGGCGA TATTCTGGAT CGCCAATGCG
CTTTTGACGC CGCTGATCCT GTTGATAGGC CTCTTCACCG ACCGCGGCCG TCTGTTGCAC
GACCTGCTGA TCGGCACGGT GGCCGTACGA CGCGATATGT ATTGA
 
Protein sequence
MSMHNEELRL PSEDWRAYQG VLSRRIFAFI IDYLIVALLW IPAAVVVFFL GILTLGLGFL 
LYPVLFVLVA MLYFGMTVGG REQASPGMRI MGVAIARTDG RPMDFLTAIV HLAIFWIANA
LLTPLILLIG LFTDRGRLLH DLLIGTVAVR RDMY