Gene Smed_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0675 
Symbol 
ID5321512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp727344 
End bp727925 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID640789612 
Producthypothetical protein 
Protein accessionYP_001326366 
Protein GI150395899 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.179061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTCG ATCCTCGCGA GAAAATCGCT CTTTTCATCG ATGGGGCCAA TCTCTACGCC 
GCGTCGAAGA GCCTGGGCTT CGACATCGAC TATCGCAAGC TGCTCAAGGC ATTCCAGAAA
CGCGGCTACC TGCTGCGCGC CTACTACTAC ACCGCGTTGA TCGAGGATCA GGAATATTCG
TCGATCCGCC CGCTGATCGA CTGGCTGGAC TATAACGGCT ACAAGGTCGT GACCAAGCCC
GCCAAGGAAT TCACCGACTC GCTCGGTCGC CGCAAGATCA AGGGCAATAT GGACATCGAA
CTGGCGATCG ATGCCATGGA GCAATCCGAA TCGGTCGATC ACCTGGTGAT CTTTTCCGGC
GATGGCGATT TCACCACGCT CGTGGAAGCG CTCCAGCGTA AGGGCCGCAA GGTTTCCGTG
GTTTCCACGA TGGCGACCCA GCCCCCCATG ATCGCCGACG ACCTGCGCCG CCAGGCCGAC
CACTTCATCG ATCTCGCCTC TCTCAGAGCC GAAATCGGCC GCGAACCGTC AGAACGCGTT
CAGCGTCCCG TCGAGCCGGT CTCCGACGAC GTCGAGCTTT AG
 
Protein sequence
MMFDPREKIA LFIDGANLYA ASKSLGFDID YRKLLKAFQK RGYLLRAYYY TALIEDQEYS 
SIRPLIDWLD YNGYKVVTKP AKEFTDSLGR RKIKGNMDIE LAIDAMEQSE SVDHLVIFSG
DGDFTTLVEA LQRKGRKVSV VSTMATQPPM IADDLRRQAD HFIDLASLRA EIGREPSERV
QRPVEPVSDD VEL