Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0675 |
Symbol | |
ID | 5321512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 727344 |
End bp | 727925 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640789612 |
Product | hypothetical protein |
Protein accession | YP_001326366 |
Protein GI | 150395899 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.179061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTCG ATCCTCGCGA GAAAATCGCT CTTTTCATCG ATGGGGCCAA TCTCTACGCC GCGTCGAAGA GCCTGGGCTT CGACATCGAC TATCGCAAGC TGCTCAAGGC ATTCCAGAAA CGCGGCTACC TGCTGCGCGC CTACTACTAC ACCGCGTTGA TCGAGGATCA GGAATATTCG TCGATCCGCC CGCTGATCGA CTGGCTGGAC TATAACGGCT ACAAGGTCGT GACCAAGCCC GCCAAGGAAT TCACCGACTC GCTCGGTCGC CGCAAGATCA AGGGCAATAT GGACATCGAA CTGGCGATCG ATGCCATGGA GCAATCCGAA TCGGTCGATC ACCTGGTGAT CTTTTCCGGC GATGGCGATT TCACCACGCT CGTGGAAGCG CTCCAGCGTA AGGGCCGCAA GGTTTCCGTG GTTTCCACGA TGGCGACCCA GCCCCCCATG ATCGCCGACG ACCTGCGCCG CCAGGCCGAC CACTTCATCG ATCTCGCCTC TCTCAGAGCC GAAATCGGCC GCGAACCGTC AGAACGCGTT CAGCGTCCCG TCGAGCCGGT CTCCGACGAC GTCGAGCTTT AG
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Protein sequence | MMFDPREKIA LFIDGANLYA ASKSLGFDID YRKLLKAFQK RGYLLRAYYY TALIEDQEYS SIRPLIDWLD YNGYKVVTKP AKEFTDSLGR RKIKGNMDIE LAIDAMEQSE SVDHLVIFSG DGDFTTLVEA LQRKGRKVSV VSTMATQPPM IADDLRRQAD HFIDLASLRA EIGREPSERV QRPVEPVSDD VEL
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