Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0648 |
Symbol | |
ID | 5321484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 699160 |
End bp | 700449 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789584 |
Product | putative heat shock protein |
Protein accession | YP_001326339 |
Protein GI | 150395872 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.304644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCCG CCCTAGGCCT CGACTTCGGC ACGACCAATT CCGTATTGGC ACAGGCCGAA GGCGCTTCGA CACGCTCCGT CATCGTGGAA AGCCCGGCTG GGAGATCGGA CACGACGCGC ACGGCCCTGT CCTTCCTGAA GGACGCCGGT CCGTCACCGC TGAAGGTCGA AGCGGGACAG GCGGCAATCC GCGAGTTCAT CGAAAATCCG GGCGAGTGCC GGTTCCTTCA ATCGATCAAA ACCTTTGCCG CAAGCGCACT CTTCCAGGGC ACATTGATTT TCGGCAAGCG CTACGAGTAC GAGGACCTGA TGCAACGCTT CCTGGCGCGG CTCAGAGACT ATGCCGGCAG CAACTGGGAG GCCACTTTCA AACGCGTCGT CGTCGGCCGC CCCGTCCAGT TCGCGGGCGC CAATCCGGAC GAGAAGCTGG CTCTCGAGCG CTATAATCGT GCGCTCACCC GTTTGGGGTT TCCGGAAGTC CATTATGTGT ACGAACCGGT GGCGGCGGCC TTCTATTTCG CGCGCAATCT CGATCGGGAC GCGACGGTGC TCGTCGCCGA TTTCGGCGGC GGTACCACCG ATTATTCGAT CATCCGTTTC GAGAGCCGGG CCGGACAACT GACGGCAACG CCGATCGGTC ACTCCGGCAT CGGTATTGCC GGGGATCATT TCGACTTCCG GATCATCGAC AACATCGTCT CGCCGCTCAT CGGAAAGGGG AGTCTGTTCA AGAGCTTCGA CAAGCTGCTC GAAGTTCCTT CGAGCTACTA CGCCAATTTC GGCCGCTGGA ATCAGCTTTC GATCTTCAAG ACATTGAGAG ATTTCGCCGA ATTGAAAAAG CTCGTTAGGG CAAGCCTGGA GCCGGAAAAG CTGGAGTCCT TCGTGGAATT GATCGAGCAT GACGAGGGCT ATCCGCTCTA TCAGGCGATT TCGGCAACCA AGATGCGGCT CTCACAGGCG GAGGAGACCG AATTCACCTT CGCACCGCTA GGAGAGCGCG CCCGCCGGAC CGTTCGTCGT GATGAATTCG AAGCCTGGAT TACGCCCGAC CTTGCCCGAA TAGAAGGGGC ACTCGACGAA ATCCTGTCCA AAACCGCGAC GACGCCGGAC GGGATCGACA AGGTGTTCCT GACCGGCGGG ACGTCCTTTG TACCGGCCGT CCGCCGACTC TTCGAGAACC GCTTCGGCGT GGAGCGCATC GAGAGCGGCG GCGAGCTCCT GTCGATTGCC CACGGCCTCG CCCTCATTGG CGAGCGCGAC GACATCGCGG CGTGGACGGC GGCAGCCTGA
|
Protein sequence | MASALGLDFG TTNSVLAQAE GASTRSVIVE SPAGRSDTTR TALSFLKDAG PSPLKVEAGQ AAIREFIENP GECRFLQSIK TFAASALFQG TLIFGKRYEY EDLMQRFLAR LRDYAGSNWE ATFKRVVVGR PVQFAGANPD EKLALERYNR ALTRLGFPEV HYVYEPVAAA FYFARNLDRD ATVLVADFGG GTTDYSIIRF ESRAGQLTAT PIGHSGIGIA GDHFDFRIID NIVSPLIGKG SLFKSFDKLL EVPSSYYANF GRWNQLSIFK TLRDFAELKK LVRASLEPEK LESFVELIEH DEGYPLYQAI SATKMRLSQA EETEFTFAPL GERARRTVRR DEFEAWITPD LARIEGALDE ILSKTATTPD GIDKVFLTGG TSFVPAVRRL FENRFGVERI ESGGELLSIA HGLALIGERD DIAAWTAAA
|
| |