| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0642 |
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| Symbol | pepN |
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| ID | 5321478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 692088 |
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| End bp | 694742 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789578 |
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| Product | aminopeptidase N |
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| Protein accession | YP_001326333 |
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| Protein GI | 150395866 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.411291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.599846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACAA ACACTGGCCA GATCGTTCAT CTGGAAAACT ACCGGCCGAC CGATTTCGTT
CTCGAAAGGG TGGACCTGAC GTTCGAACTC GACCCGCAGG AAACGAAGGT CGAGGCGCGC
ATGATCTTCC ACCGCCGCGA AGGCGTCAGT CCCTCGGCAC CGCTCGTCCT CGATGGCGAC
GAGCTCGTCA TGACCGGCCT GCTGCTCGAC CAGGAAGCGA TACCGGGCAC GCTCTATGAA
GCGACCGACG ACACGCTCAT CATCCGCGAA CTGCCCGAAA GGGCTCCTTT CGAGATCACC
GTCACGACGG TATTGTCGCC GGAGACCAAC ACCAAGCTGA TGGGCCTTTA CCGCACGAGC
AACGTCTATT GCACCCAGTG CGAAGCCGAA GGCTTCCGTC GCATTACCTA TTTCCCGGAT
CGTCCAGACG TGCTGGCGGT CTATACCGTC AACATCATCG CGGACAAGGC TGCGGCGCCG
CTTCTGCTTT CGAACGGCAA CTATCTCGGT GGCGCCGACA TGGGCGACGG ACGCCATTTC
GCCTCCTGGT TCGATCCGCA TCCGAAACCG AGCTATCTCT TTGCACTCGT TGCCGGCGAT
CTCGGCGTCG TAGAGGACAC CTTCACCACC GTTTCCGGCG GCAACGTCGC CCTCAAGATC
TATGTCGAGC ACGGCAAGGA GCCGCGGGCG ACCTATGCCA TGGACGCGCT GAAACGGTCG
ATGAAATGGG ACGAGGACGT CTTCGGCCGT GAATACGACC TCGACATATT CATGATCGTT
GCGGTCTCCG ATTTCAACAT GGGCGCCATG GAGAACAAGG GCCTCAACGT TTTCAACGAC
AAATATGTGC TCGCCGATCC CGAAACGGCG ACCGATGCGG ACTATGCCAA CATCGAGGCG
ATCATCGCGC ACGAATATTT CCACAACTGG ACCGGCAACC GCATTACCTG CCGCGACTGG
TTCCAGCTCT GCCTGAAGGA AGGCCTGACC GTCTACCGCG ACCACGAGTT TTCCGCCGAT
ATGCGCTCGC GCGCCGTGAA GCGCATCGCC GAAGTGCGGC ATTTGAAATC CGAGCAGTTC
CCGGAAGATG CCGGTCCCCT CGCCCACCCT GTACGGCCGA CGCAATACCG CGAGATCAAC
AATTTCTACA CGACGACGGT CTACGAAAAG GGATCCGAGG TGACGCGGAT GATCGCGACC
ATCCTCGGGC GCGATCTCTT CAAGAAGGGC ATGGACCTCT ATTTCGAGCG TCACGACGGC
CAGGCGGTGA CGATCGAGGA TTTCGTCGCC TGCTTCGAAG CTGCCAGCGG CCGCGACCTC
AAGCAATTCT CACTATGGTA CCATCAGGCG GGAACCCCGC TCGTTACCGC TTCGGGCGTC
TATAACACCG CCGGGCAGAC ATACACTCTC TCGCTCGAGC AGACCGTGCC GCCGACACCC
GGACAAAGCA GCAAGGCACC GATGCATATC CCTCTTCGCT TCGGGCTGCT GCTTCCGGAC
GGAAGCGAGG CGACGCCCAC GGCCGTCTCC GGCGCCGAGA TCAGCGGGGA CGTACTGCAC
CTGACCGAGC GAAAACAGAG CGTCACCTTC TCGGGTGTTC CGGCGCAGCC TGTCCCTTCC
TTCAACCGAG ACTTTTCGGC GCCGATCAAT TTGCACGTTG TGCAAAGCGC CGGGGACCGT
GCCTTGATCG CGCGTTTCGA AACCGACCTC TTCGCACGTT GGCAGGCGCT GAATACGATG
GCACTCGACA ATCTCGTCAA GGCGGCGGCG CAAACGCGTG CCGGACGGCC GGTCGCCTGC
GACGACGCGC TCGTCGACGC GCTTCTCGCC GCGGCCGCAG ACAACCGGCT GGAGCCCGCA
TTCCGCGCGC AGGTGTTGTC CTTGCCGAGC GAAACCGACA TCGGCCGCGA AATCGGCGGC
AGCAACGACC CGGATGCGAT CCATACCGGC CGTCAGGCTG TTCTCACCGC CATCGCCACG
GCGGGCAAGG ACAGTTTCGC GCGGCTGGTT CACGAGATGT CCCAGTCCGG CCCGTTCCGT
CCGGACGCCG AAAGCGCCGG GCGTCGAGCC CTGCGCTATT CCGGTCTCTT CTATCTCGTC
TATGCCGACG GGCAGCCGGG CAAAGCCGCT GATGCGTTTC GCTCCGCCAA CAATATGACC
GATCTCAGCC AGGCGCTGAC GCTCCTTGCG CATCGTTTTC CGGATGCCGA GGAGACGGCG
GAGGCCTTGG CCGCGTTCAA GGAACGCTTT GCCAATAATG CGCTGGTCAT CGACAAGTGG
TTCGCCATTC AGGCGACGAT CCCCGGAGCT GCGACGCTCG ACCGGGTTCG GGGGCTGATG
TCGGATCCGC TCTTCAATGC CAACAACCCC AACCGGGTAC GCTCGCTAGT CGGCACCTTC
GCATTCGCGA ACGCCACAGG CTTCAATCGC GTCGATGGCG AAGGCTATCG TTTCCTCGCC
CGACAGATCC TCGACATCGA CGCGCGCAAT CCTCAACTTG CCGCGCGCAT TCTGACGTCG
ATGCGCTCGT GGGGTTCGCT GGAAGAGGTT CGGGCCAGCC ACGCCCGAAG TGCGCTCGAG
GAGATTGCGC GTGCCTCCAG CCTTTCCGCG GATGTCAGCG ACATCGTCGA CCGCATGCTC
GAAGACAAGC ACTGA
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| Protein sequence | MRTNTGQIVH LENYRPTDFV LERVDLTFEL DPQETKVEAR MIFHRREGVS PSAPLVLDGD
ELVMTGLLLD QEAIPGTLYE ATDDTLIIRE LPERAPFEIT VTTVLSPETN TKLMGLYRTS
NVYCTQCEAE GFRRITYFPD RPDVLAVYTV NIIADKAAAP LLLSNGNYLG GADMGDGRHF
ASWFDPHPKP SYLFALVAGD LGVVEDTFTT VSGGNVALKI YVEHGKEPRA TYAMDALKRS
MKWDEDVFGR EYDLDIFMIV AVSDFNMGAM ENKGLNVFND KYVLADPETA TDADYANIEA
IIAHEYFHNW TGNRITCRDW FQLCLKEGLT VYRDHEFSAD MRSRAVKRIA EVRHLKSEQF
PEDAGPLAHP VRPTQYREIN NFYTTTVYEK GSEVTRMIAT ILGRDLFKKG MDLYFERHDG
QAVTIEDFVA CFEAASGRDL KQFSLWYHQA GTPLVTASGV YNTAGQTYTL SLEQTVPPTP
GQSSKAPMHI PLRFGLLLPD GSEATPTAVS GAEISGDVLH LTERKQSVTF SGVPAQPVPS
FNRDFSAPIN LHVVQSAGDR ALIARFETDL FARWQALNTM ALDNLVKAAA QTRAGRPVAC
DDALVDALLA AAADNRLEPA FRAQVLSLPS ETDIGREIGG SNDPDAIHTG RQAVLTAIAT
AGKDSFARLV HEMSQSGPFR PDAESAGRRA LRYSGLFYLV YADGQPGKAA DAFRSANNMT
DLSQALTLLA HRFPDAEETA EALAAFKERF ANNALVIDKW FAIQATIPGA ATLDRVRGLM
SDPLFNANNP NRVRSLVGTF AFANATGFNR VDGEGYRFLA RQILDIDARN PQLAARILTS
MRSWGSLEEV RASHARSALE EIARASSLSA DVSDIVDRML EDKH
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