Gene Smed_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0503 
Symbol 
ID5321337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp545936 
End bp546616 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID640789437 
ProductABC transporter related 
Protein accessionYP_001326194 
Protein GI150395727 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.182722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAATTC GCTTTACCAA TTGTTCCGTC AGCTTCGGCG ACCGGGTCGC GCTTCACAGC 
CTGACCCTTG CCCTCGACGA GCGCCGGGTC GGCATCATCG GTCTTAACGG TTCCGGCAAG
ACCACGTTCG CACGGCTGAT GAACGGACTC GTCAAGCCGA CAACCGGCAA AGTGAAGGTC
AACGGTCTCG ACACGGTCGA GGACGACAGG GCGGTTCTCA CCGAAGCCGG CTTTATCTTT
CAGAATCCTC AACACCAGCT GATCATGCCG ATCGTATCCG ACGACATCGC CTTCGGGCTC
AAGAACCGCG GGCTGCCGGC GCATGAAATC TCGTCGCGGA CCGAGGCAGC CCTTGCACGC
TTCGGTGTCG GCCATCTCGC TCGCAGGCGG GTGCACGAAC TGTCCGGCGG CGAAACGCAG
CTCGTCGCAA TGGCAAGCGT CGTCGTCACC GGACCGAAAA TCCTGATCCT TGATGAGCCG
ACCAATCAGC TCGACCTCAG AAATCGCCGG ATGGTGGCCG AAACCATCGA AGCGCTCGAC
GAAGACACGA TCGTCATCAC ACACGACCTG GCCCTCGTCG AAGGCGCCGA GCGGGTTCTG
CTGTTCCACG AGGGCCGGCT CATCGCCGAC GGAGCGCCGG ACGAAACCAT CCGTCGCTAT
CACGAGGTCG CCGGATGCTG A
 
Protein sequence
MEIRFTNCSV SFGDRVALHS LTLALDERRV GIIGLNGSGK TTFARLMNGL VKPTTGKVKV 
NGLDTVEDDR AVLTEAGFIF QNPQHQLIMP IVSDDIAFGL KNRGLPAHEI SSRTEAALAR
FGVGHLARRR VHELSGGETQ LVAMASVVVT GPKILILDEP TNQLDLRNRR MVAETIEALD
EDTIVITHDL ALVEGAERVL LFHEGRLIAD GAPDETIRRY HEVAGC