Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0503 |
Symbol | |
ID | 5321337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 545936 |
End bp | 546616 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789437 |
Product | ABC transporter related |
Protein accession | YP_001326194 |
Protein GI | 150395727 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.182722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAATTC GCTTTACCAA TTGTTCCGTC AGCTTCGGCG ACCGGGTCGC GCTTCACAGC CTGACCCTTG CCCTCGACGA GCGCCGGGTC GGCATCATCG GTCTTAACGG TTCCGGCAAG ACCACGTTCG CACGGCTGAT GAACGGACTC GTCAAGCCGA CAACCGGCAA AGTGAAGGTC AACGGTCTCG ACACGGTCGA GGACGACAGG GCGGTTCTCA CCGAAGCCGG CTTTATCTTT CAGAATCCTC AACACCAGCT GATCATGCCG ATCGTATCCG ACGACATCGC CTTCGGGCTC AAGAACCGCG GGCTGCCGGC GCATGAAATC TCGTCGCGGA CCGAGGCAGC CCTTGCACGC TTCGGTGTCG GCCATCTCGC TCGCAGGCGG GTGCACGAAC TGTCCGGCGG CGAAACGCAG CTCGTCGCAA TGGCAAGCGT CGTCGTCACC GGACCGAAAA TCCTGATCCT TGATGAGCCG ACCAATCAGC TCGACCTCAG AAATCGCCGG ATGGTGGCCG AAACCATCGA AGCGCTCGAC GAAGACACGA TCGTCATCAC ACACGACCTG GCCCTCGTCG AAGGCGCCGA GCGGGTTCTG CTGTTCCACG AGGGCCGGCT CATCGCCGAC GGAGCGCCGG ACGAAACCAT CCGTCGCTAT CACGAGGTCG CCGGATGCTG A
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Protein sequence | MEIRFTNCSV SFGDRVALHS LTLALDERRV GIIGLNGSGK TTFARLMNGL VKPTTGKVKV NGLDTVEDDR AVLTEAGFIF QNPQHQLIMP IVSDDIAFGL KNRGLPAHEI SSRTEAALAR FGVGHLARRR VHELSGGETQ LVAMASVVVT GPKILILDEP TNQLDLRNRR MVAETIEALD EDTIVITHDL ALVEGAERVL LFHEGRLIAD GAPDETIRRY HEVAGC
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