| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0426 |
|---|
| Symbol | lpxK |
|---|
| ID | 5321260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 459818 |
|---|
| End bp | 460858 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640789361 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_001326118 |
|---|
| Protein GI | 150395651 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.44272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.951399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCAG AAGCGCCCCC ATTCTGGTGG ACCAAGGCCG ACTGGCGCGC CTATGCTCTT
TGGCCCTTCT CCTGGCTCTA TGGCCGTATC GCCGGAATGC GGATGGACCG CGCGCGCCGG
GCCACCTCGG CCGTGCCGCT GATCTGCATC GGCAACTTCA CAGTCGGTGG AGCCGGAAAG
ACACCGACGG CCATTGCGAT TGCGCGGGCC GCCAAGGCAA GGGGCTTGAA GCCGGCTTTC
CTGAGCCGCG GCTATGGAGG ATCGCTTGAT GTCACGACCT TGGTCGACCC CGAACACCAT
CGCGCCCGCG ACGTAGGCGA CGAGCCGCTG CTGCTTGCCC GCGAGGCGCT CACGGTGATC
TGCCGTCGCA GGGTGGACGG AGCACGGAAG CTTGCCGCGG AAGGTGCGGA TATCATCATC
ATGGACGATG GGTTCCAGAG TGCCCGGCTC GTGTTCGATT TTGCTCTTAT CGTGGTCGAT
TCCGGCCGCG GCATCGGCAA TGGCCATCTT GTCCCTTCCG GACCGGTCCG GGCGCCGATC
GGCAATCAGC TGCGCCACGC CACGGCCCTT CTGAAGCTCG GCCACGGTTC CGCTGCCGAT
CCCGTGGTTC GCCGAGCGTC CCGGGCAGGC AAGCCCGTCT ATGTGGCTGA AACCGTGCGC
ATCGACGAGG GATCTCTCGT CGGCGTCAAG GTTCTCGCCT GGGCCGGGAT TGCGGATACG
GAGAAGTTCT TCAAAACGGT GCGCGAAACC GGCGCGATCA TCGAGGAAAC CCGAAGCTTT
CCGGATCACC ATCATTTCTC CGAGGACGAG ATTGCCGACC TCATCGATCG TGCAACAAGC
CGGGGCTACA CGCTCGTGAC CACGGCCAAG GACATTGTTC GTCTGGAGCC TGGCCACGGA
CGGGCAGGGG AACTGGCGGC AAAGAGCCGC GTCATCGAGA TCGAGGTGCG CTTCGACGAT
CCGGCAGCGC CGGGGAAGAT CATCGACGCG GCGCTTGCTT CCGCACGCGC ACGCCGGCTG
CGCGAGCACA AGTCGGGTTA A
|
|---|
| Protein sequence | MVSEAPPFWW TKADWRAYAL WPFSWLYGRI AGMRMDRARR ATSAVPLICI GNFTVGGAGK
TPTAIAIARA AKARGLKPAF LSRGYGGSLD VTTLVDPEHH RARDVGDEPL LLAREALTVI
CRRRVDGARK LAAEGADIII MDDGFQSARL VFDFALIVVD SGRGIGNGHL VPSGPVRAPI
GNQLRHATAL LKLGHGSAAD PVVRRASRAG KPVYVAETVR IDEGSLVGVK VLAWAGIADT
EKFFKTVRET GAIIEETRSF PDHHHFSEDE IADLIDRATS RGYTLVTTAK DIVRLEPGHG
RAGELAAKSR VIEIEVRFDD PAAPGKIIDA ALASARARRL REHKSG
|
|---|
| |