| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0329 |
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| Symbol | |
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| ID | 5321162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 358968 |
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| End bp | 360563 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789264 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001326022 |
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| Protein GI | 150395555 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.889875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0616043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TCACTACTCT TTTAGCGGCG ACGGCGCTCG CCACGCTTAT GGCCGGCACC
GCCTGGTCGA AAACGTTCGT CTTCTGCTCG GAAGGTTCGC CGGAGGGCTT TGATCCTGGC
CTCTATACGG CCGGCACCAC GTTCGACGCT GCCGCCCACA CCGTTTACAG CCGTCTTCTC
GAGTTCAAGA AGGGCACGAC CGAAACGGAA CCCGGGCTCG CCGAAAGCTG GACGATCTCC
GACGACGGCC TCGAATACAC CTTCAAGCTG CGTCCCGGCG TCAAGTTTCA GACGACCGAA
TACTTCACTC CGACCCGTGA ATTGAACGCC GACGATGTCG TCTTTTCGAT CGAGCGCCAG
TGGAAATCGG ACCATCCATG GCATGGCTAT GTGACCGGCG GTTCCTGGGA ATATTTTGCC
GGCATGGGGC TGCCGGAACT GCTCGAGTCT GTCGAGAAGG TCGACGACAT GACCGTCAAG
ATCAAGCTGA AGCGCAAGGA AGCGCCGTTC CTGGCCAATC TTGCCATGCC CTTCGCGTCG
ATCATGTCGA AGGAATATGC CGACAAGCTG CAGGCCGAAG GCAAGATGAA CCAGCTCAAC
CAGATGCCGC TCGGCACCGG TCCCTTCGCC TTTGTCGCCT ATCAGCAGGA CGCGGTCATC
CGCTACAAGG CGCATCCGGA ATTCTGGGGC GGAAAGCAGA AGATCGACGA TCTGGTCTTT
GCGATCACCA CGGACGCGGC CGTTCGCTTC CAGAAGCTGC AGGCCGGCGA ATGCCACCTG
ATGCCCTATC CGAACGCGGC GGATGTCGAG GCAATGAAGG CCGATCCGAA CCTCAAGGTG
ATGGAGCAGG CCGGCCTCAA CGTCGCCTAT CTCGCCTATA ACACGACGCA GCCGCCCTTC
GATAAGCTCG AGGTGCGCAA GGCGCTGAAC AAGGCGATCA ACAAGGAGGC GATCGTCGAC
GCGGTCTTCC AGGGACAGGC GCAACCGGCG ACCAATCCGA TTCCGCCGAC CATGTGGTCC
TATAACGAGC AGATCGAAGA CGACACCTAT GATCCGGAAG CGGCGAAGAA GATGCTCGAG
GATGCCGGCG TGAAAGATCT TTCGATGAAG GTCTGGGCGA TGCCAGTGGC GCGTCCCTAC
ATGCTCAACG CCCGTCGCGC CGCCGAACTG ATGCAGGCCG ACTTCGCCAA GGTCGGCGTC
AAGGTCGAAA TCGTCTCCTA CGAATGGGCC GAATATCTCG AGAAGTCCAA GGCGAAGGAC
CGCGACGGTG CCGTGATCCT CGGCTGGACA GGCGACAACG GCGATCCGGA CAACTTCCTC
GACACGCTGC TCGGTTGCGA CGCCGTCGGC GGCAACAACC GCGCGCAATG GTGCAACCAG
GAGTTCGACG AACTCGTCAC GAAGGCGAAG GAAGCATCCG ACGTCGCAGA GCGCACCAAG
CTCTATGAAG AGGCGCAGGT CGTCTTCAAG CGCGAAGCCC CCTGGGCTAC GCTCGACCAC
TCGCTCTCCA TCGTCCCGAT GCGCAAGAAT GTCGAAGGCT TCGTGCAGAG CCCGCTCGGC
GACTTTGCTT TCGACGGCGT TGATATTGTA GAGTAA
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| Protein sequence | MKKLTTLLAA TALATLMAGT AWSKTFVFCS EGSPEGFDPG LYTAGTTFDA AAHTVYSRLL
EFKKGTTETE PGLAESWTIS DDGLEYTFKL RPGVKFQTTE YFTPTRELNA DDVVFSIERQ
WKSDHPWHGY VTGGSWEYFA GMGLPELLES VEKVDDMTVK IKLKRKEAPF LANLAMPFAS
IMSKEYADKL QAEGKMNQLN QMPLGTGPFA FVAYQQDAVI RYKAHPEFWG GKQKIDDLVF
AITTDAAVRF QKLQAGECHL MPYPNAADVE AMKADPNLKV MEQAGLNVAY LAYNTTQPPF
DKLEVRKALN KAINKEAIVD AVFQGQAQPA TNPIPPTMWS YNEQIEDDTY DPEAAKKMLE
DAGVKDLSMK VWAMPVARPY MLNARRAAEL MQADFAKVGV KVEIVSYEWA EYLEKSKAKD
RDGAVILGWT GDNGDPDNFL DTLLGCDAVG GNNRAQWCNQ EFDELVTKAK EASDVAERTK
LYEEAQVVFK REAPWATLDH SLSIVPMRKN VEGFVQSPLG DFAFDGVDIV E
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