Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0276 |
Symbol | flgE |
ID | 5321108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 296360 |
End bp | 297568 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789211 |
Product | flagellar hook protein FlgE |
Protein accession | YP_001325970 |
Protein GI | 150395503 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCT ACGGTACCAT GAGAACGGGC GTGTCCGGCA TGAACGCCCA GTCGAACCGG CTCAGCACAG TCGCCGAGAA CATCGCCAAC GCCAATACCA CCGGCTACAA GCGGGCGTCG ACGGAATTCT CATCGATGAT CCTGCCGTCG GGCAACGGCG CTTACAATTC CGGCGGCGTA CAGACGGAGG TGCGCTACAG TATTTCCCAG CAGGGCGCGA CGACCTTCAC CACCTCGGCG AGCGACCTCG CCATCGACGG CGGCGGCTTC TTCATCGTCG AAGGCGCAAA CGGCCAGGAA TATCTGACCC GCGCCGGCTC CTTCGTTCCG GACAGTGAGG GCAATCTGGT CAACGCCGCC GGCTTCACGC TGATGGGCTA CGAATACGAG GCTGGCGTCG ATCCGACCGT GGTCGTCAAC GGTTTCGACG GGCTGACGAG GGTCAATCTC GCTTCCAAAG GCCTCATCGC AGCGGGGTCG ACCACCGGCT CCATGGGCGC GAACCTGCCT TCGGGCGCAG CTGTCGGCGA CATTTCTACA ACTTCGCTCG TCGTCTATGA CAGCCAGGGC AATACCCGCA TCCTGGACTT CAACTACGAA AAGACCGCTG CGAACGCCTG GTCGGTCGAA GTCGTCGACC GGACCTCGTC GACGGTTCTC GGTACGCAAA CGTTGAATTT CAACGCGGAT GGTTCCCTCA CAGCGACGCC AGCCACCTTG ACGACGTCCG CGATGGCAAG CCTTCCCGGT ACGGGTGCAA ACCTTTCGGC GCTGACCATC GACCTGACGA AGACGACCCA GCTTGGCTAC GCCTTCAACG CCGACGGCGG CTCGATCGAC GGCAATGCGC CAAGCAAGGT TGCCGGCTAC CAGATCGACT CCGACGGTAT CGTCTATGTC AAATACGAGA ACGGCAAACT CGATCCGCGC TATCGCATCG CTCTCGCCAA CGTCCAGAGC CCGGACAAGC TGAAGCCTGA ATCGGGCAAC GTCTATTCGC AGGGCGTCGA TTCCGGTGTC ATCATCACCG GTTTCGCCGG ATCGGGCGAT TTTGGTGAAA TCCTCTCCGG CGCTCTCGAA AGCTCCAATG TCGACATTGC CGAGGAACTG ACGGCGATGA TCGAGTCGCA GCGCAACTAC ACGGCAAACT CCAAGGTCTT CCAGACCGGC TCGGAGCTGC TCGAAGTGCT CGTGAATCTG AAGCGCTAA
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Protein sequence | MSLYGTMRTG VSGMNAQSNR LSTVAENIAN ANTTGYKRAS TEFSSMILPS GNGAYNSGGV QTEVRYSISQ QGATTFTTSA SDLAIDGGGF FIVEGANGQE YLTRAGSFVP DSEGNLVNAA GFTLMGYEYE AGVDPTVVVN GFDGLTRVNL ASKGLIAAGS TTGSMGANLP SGAAVGDIST TSLVVYDSQG NTRILDFNYE KTAANAWSVE VVDRTSSTVL GTQTLNFNAD GSLTATPATL TTSAMASLPG TGANLSALTI DLTKTTQLGY AFNADGGSID GNAPSKVAGY QIDSDGIVYV KYENGKLDPR YRIALANVQS PDKLKPESGN VYSQGVDSGV IITGFAGSGD FGEILSGALE SSNVDIAEEL TAMIESQRNY TANSKVFQTG SELLEVLVNL KR
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