| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0248 |
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| Symbol | |
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| ID | 5321080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 271834 |
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| End bp | 272481 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789183 |
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| Product | flagellar motor switch protein FliN |
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| Protein accession | YP_001325942 |
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| Protein GI | 150395475 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00193923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.661473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGAGG CAAGCTTCAA CTGGAATATT CGGCACATGG CACCCAAGAA AGCAGCACCC
ATCGCAGAAC CGGCCGTATT CGCGGCAGAC GCCGAGCTCG ACCAGGCGAT CGACGACCTG
CGCGGCGTCC TGAAGAAGGA CGGCGAAACG CCTGACTTCG GCGCCGATTC CGCCGCTTCG
GGGCCGCTCG AAGAGTCGAT GGATTTCAGC AGCGGGTTCG CTCCCTCCGG CGGAGCCGGG
TTCGGCGATC TTTCTGACGC CTCCTTTGAC GGCGGTTTTG GCGGCGATTT CGCCGAAACC
GGAGTGAGCG GAGGCTTCGC CGCGGGTCCG GGGTTTGCCG GCGGCGAGTT CGATGCGACG
CCGGCTGCTG CCGAACCAAC GCCCGGCAGC GGAATGAGCG CTAATCTGGA CCTGATCATG
GATATCCCGA TCGATATCCA GATCGTGCTC GGGACCAGCC GGATGCAGGT TTCCAGCCTC
ATGAACCTCA CCGAGGGCGC AACGATCGCG CTCGACCGCA AGATCGGCGA ACCGGTAGAG
ATCATGGTCA ATGGGCGGGT GATCGGCCGC GGAGAAATCA CCGTTCTCGA GGGCGATGTG
ACCCGCTTCG GCGTCAAGCT CCTTGAGATC AAAGGCAGCA GGAAATAG
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| Protein sequence | MPEASFNWNI RHMAPKKAAP IAEPAVFAAD AELDQAIDDL RGVLKKDGET PDFGADSAAS
GPLEESMDFS SGFAPSGGAG FGDLSDASFD GGFGGDFAET GVSGGFAAGP GFAGGEFDAT
PAAAEPTPGS GMSANLDLIM DIPIDIQIVL GTSRMQVSSL MNLTEGATIA LDRKIGEPVE
IMVNGRVIGR GEITVLEGDV TRFGVKLLEI KGSRK
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