Gene Smed_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0244 
Symbol 
ID5321076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp268184 
End bp268927 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID640789179 
Productresponse regulator receiver protein 
Protein accessionYP_001325938 
Protein GI150395471 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.50277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATC TCGTGACCGA AAACCGTGGC TGCGACGCTG GCCGGCCGGG CCGAAACGGG 
CGCGCGGCGC AAGCGGCGGG GCTCGTGACG CGACTGCAGG CCATGCAACG GCAGATCAAC
GCGAGGAACT TCGCGGTTCT GCGGACGAAT GGAAGGGGCT TGCCTGCAGC GCGCAAGCTA
ACCTGCGTGC TCCACAACTG GGGAACCTCT TGCGAGGAAA TCGCGCGCGA TCTGATAGAT
CATTATGGCG AGGAACTGCT TCAGCACCTC GACCATTCGC TGCTGCCGGT GCTTTGGGAC
GGCAAGGGCG AGCACCAGAC TGCCGAAACC TCCGATTTCG GTCCCTTCAC GCGCCGGCTG
AAGGACCGCA AGCTCCCATA TTCGGGGATC GCGTTGCCGA TACGGCTCGG CGCGCAAGGC
AACGGCTACG TGGTTTTCGC CGGAAGCTAC ATCGATGCTT CGGGCGAACA GATAGTGGAG
CTGCACGGCC GCAGCGCGCA GATCATGACA GACCTGCTGA CCTTTGACGA GAAGCGCCCG
CTCAAGGCCG AGGCCCTGAG CGATCGCGAA ATCTCCTGTC TGCAGATGGC CGGCGACGGT
CATATAAGTG AAGAGATCGC CGAAAAGATG GGTCTCTCCG TGCACACCGT GAACGCTTAT
CTCGGCGCCG CGACGACGAA GCTCGACTCG GTCAACCGCA TACAGGCGAT CGCCAAGGCG
ATACGGCTCG GCTATATCAG CTGA
 
Protein sequence
MTYLVTENRG CDAGRPGRNG RAAQAAGLVT RLQAMQRQIN ARNFAVLRTN GRGLPAARKL 
TCVLHNWGTS CEEIARDLID HYGEELLQHL DHSLLPVLWD GKGEHQTAET SDFGPFTRRL
KDRKLPYSGI ALPIRLGAQG NGYVVFAGSY IDASGEQIVE LHGRSAQIMT DLLTFDEKRP
LKAEALSDRE ISCLQMAGDG HISEEIAEKM GLSVHTVNAY LGAATTKLDS VNRIQAIAKA
IRLGYIS