Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0244 |
Symbol | |
ID | 5321076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 268184 |
End bp | 268927 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789179 |
Product | response regulator receiver protein |
Protein accession | YP_001325938 |
Protein GI | 150395471 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.50277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTATC TCGTGACCGA AAACCGTGGC TGCGACGCTG GCCGGCCGGG CCGAAACGGG CGCGCGGCGC AAGCGGCGGG GCTCGTGACG CGACTGCAGG CCATGCAACG GCAGATCAAC GCGAGGAACT TCGCGGTTCT GCGGACGAAT GGAAGGGGCT TGCCTGCAGC GCGCAAGCTA ACCTGCGTGC TCCACAACTG GGGAACCTCT TGCGAGGAAA TCGCGCGCGA TCTGATAGAT CATTATGGCG AGGAACTGCT TCAGCACCTC GACCATTCGC TGCTGCCGGT GCTTTGGGAC GGCAAGGGCG AGCACCAGAC TGCCGAAACC TCCGATTTCG GTCCCTTCAC GCGCCGGCTG AAGGACCGCA AGCTCCCATA TTCGGGGATC GCGTTGCCGA TACGGCTCGG CGCGCAAGGC AACGGCTACG TGGTTTTCGC CGGAAGCTAC ATCGATGCTT CGGGCGAACA GATAGTGGAG CTGCACGGCC GCAGCGCGCA GATCATGACA GACCTGCTGA CCTTTGACGA GAAGCGCCCG CTCAAGGCCG AGGCCCTGAG CGATCGCGAA ATCTCCTGTC TGCAGATGGC CGGCGACGGT CATATAAGTG AAGAGATCGC CGAAAAGATG GGTCTCTCCG TGCACACCGT GAACGCTTAT CTCGGCGCCG CGACGACGAA GCTCGACTCG GTCAACCGCA TACAGGCGAT CGCCAAGGCG ATACGGCTCG GCTATATCAG CTGA
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Protein sequence | MTYLVTENRG CDAGRPGRNG RAAQAAGLVT RLQAMQRQIN ARNFAVLRTN GRGLPAARKL TCVLHNWGTS CEEIARDLID HYGEELLQHL DHSLLPVLWD GKGEHQTAET SDFGPFTRRL KDRKLPYSGI ALPIRLGAQG NGYVVFAGSY IDASGEQIVE LHGRSAQIMT DLLTFDEKRP LKAEALSDRE ISCLQMAGDG HISEEIAEKM GLSVHTVNAY LGAATTKLDS VNRIQAIAKA IRLGYIS
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