Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3994 |
Symbol | |
ID | 6474888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4513639 |
End bp | 4514826 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642733207 |
Product | benzoate transporter |
Protein accession | YP_002030376 |
Protein GI | 194367766 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000979992 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.049779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC AGGTGCGGCG GGTGTGGTGG CGCGATCTTT CGATGCCGGC GATCGTCGCT GGCTTCATTA CTGTATTGGT CGGCTTCGCC AGTTCGGCCG TGATCGTGTT CCAGGCTGCA CAAGCCGTCG GTGCCGACCA GGCGCAGATC GCCTCATGGA TGTGGGCGCT GGGGCTGGGC ATGGGCGTGA CCTGCATCGG CCTGTCGCTG CGCTATCGCG TGCCGGTGGT GACCGCATGG TCGACCCCGG GCGCGGCGAT GCTGGTGGTC GGTGCCGGTG GCGCCTCACT GTCTGAAGCG ACCGGCGCCT TCCTGCTTGC CGCGGTGCTG GGCATGCTGG CCGGCTTCTC CGGTATCTTC GCCCGCCTGA TGCAACGGGT GCCGATGGCA CTGGCCGCCG GCATGCTGGC CGGCGTGCTG CTGCGCTTTG GCCTGGATGT GTTTGTGGCG ATGAACACCC AACTGGTGCT GGCGCTGGCG ATGTTCGCCA CCTGGCTGGC CGGGCGCCGC CTGTTCCCAC GCTATGCAGT GATCGCCACT CTGGCGGTCG GTATCGCGGT CGCGGCCAGC CGCGGTCTGC TGCACGCACA ACAGGTACAA CTGCAACTGG CAGTACCTCA GTGGATCACG CCGTCACTAT CGTGGACGGC CGTGGCAGGC ATCGCCCTGC CCCTGTTCGT GGTCACCATG GCCTCGCAGA ACATTCCCGG CGTCGCGGTG ATGCGCGCAT CCGGCTACGA AGCACCGGTG TCGCCACTGA TCGGCTGGAT CGGTGTGGTC AACACGCTGC TGGCTCCCTT CGGCGCCTAT GCGCTCAACC TCGCCGCAAT CACCGCCGCG ATCTGCATGG GCCGCGATGC CCATGAAGAT CCGGCGCGAC GCTATACCGC GGCCATGGCG GCGGGCGCCT TCTACATCGT GATCGGACTG TTCGGTGCCA CCGTGGCGGC ACTGTTCGCC GCGTTCCCGA AGGAACTGGT GGCCTGCGTG GCCGGTATCG CGCTGTTCGG CACCATCGGC AACAGCCTGG CCAGCGCGCT GGCGGTGGAA CGTGACCGCG AGGCGGCACT GGTTACCTTC CTGGTCACCG CCTCCGGGGT CAGCCTGGCC GGCATCGGCT CGGCGTTCTG GGGGCTGGTG GCCGGAGCCC TGTGCCTGCT GGTACTGCGG CCACGCCAGG CCGGCTGA
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Protein sequence | MNMQVRRVWW RDLSMPAIVA GFITVLVGFA SSAVIVFQAA QAVGADQAQI ASWMWALGLG MGVTCIGLSL RYRVPVVTAW STPGAAMLVV GAGGASLSEA TGAFLLAAVL GMLAGFSGIF ARLMQRVPMA LAAGMLAGVL LRFGLDVFVA MNTQLVLALA MFATWLAGRR LFPRYAVIAT LAVGIAVAAS RGLLHAQQVQ LQLAVPQWIT PSLSWTAVAG IALPLFVVTM ASQNIPGVAV MRASGYEAPV SPLIGWIGVV NTLLAPFGAY ALNLAAITAA ICMGRDAHED PARRYTAAMA AGAFYIVIGL FGATVAALFA AFPKELVACV AGIALFGTIG NSLASALAVE RDREAALVTF LVTASGVSLA GIGSAFWGLV AGALCLLVLR PRQAG
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