Gene Smal_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3994 
Symbol 
ID6474888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4513639 
End bp4514826 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID642733207 
Productbenzoate transporter 
Protein accessionYP_002030376 
Protein GI194367766 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000979992 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.049779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC AGGTGCGGCG GGTGTGGTGG CGCGATCTTT CGATGCCGGC GATCGTCGCT 
GGCTTCATTA CTGTATTGGT CGGCTTCGCC AGTTCGGCCG TGATCGTGTT CCAGGCTGCA
CAAGCCGTCG GTGCCGACCA GGCGCAGATC GCCTCATGGA TGTGGGCGCT GGGGCTGGGC
ATGGGCGTGA CCTGCATCGG CCTGTCGCTG CGCTATCGCG TGCCGGTGGT GACCGCATGG
TCGACCCCGG GCGCGGCGAT GCTGGTGGTC GGTGCCGGTG GCGCCTCACT GTCTGAAGCG
ACCGGCGCCT TCCTGCTTGC CGCGGTGCTG GGCATGCTGG CCGGCTTCTC CGGTATCTTC
GCCCGCCTGA TGCAACGGGT GCCGATGGCA CTGGCCGCCG GCATGCTGGC CGGCGTGCTG
CTGCGCTTTG GCCTGGATGT GTTTGTGGCG ATGAACACCC AACTGGTGCT GGCGCTGGCG
ATGTTCGCCA CCTGGCTGGC CGGGCGCCGC CTGTTCCCAC GCTATGCAGT GATCGCCACT
CTGGCGGTCG GTATCGCGGT CGCGGCCAGC CGCGGTCTGC TGCACGCACA ACAGGTACAA
CTGCAACTGG CAGTACCTCA GTGGATCACG CCGTCACTAT CGTGGACGGC CGTGGCAGGC
ATCGCCCTGC CCCTGTTCGT GGTCACCATG GCCTCGCAGA ACATTCCCGG CGTCGCGGTG
ATGCGCGCAT CCGGCTACGA AGCACCGGTG TCGCCACTGA TCGGCTGGAT CGGTGTGGTC
AACACGCTGC TGGCTCCCTT CGGCGCCTAT GCGCTCAACC TCGCCGCAAT CACCGCCGCG
ATCTGCATGG GCCGCGATGC CCATGAAGAT CCGGCGCGAC GCTATACCGC GGCCATGGCG
GCGGGCGCCT TCTACATCGT GATCGGACTG TTCGGTGCCA CCGTGGCGGC ACTGTTCGCC
GCGTTCCCGA AGGAACTGGT GGCCTGCGTG GCCGGTATCG CGCTGTTCGG CACCATCGGC
AACAGCCTGG CCAGCGCGCT GGCGGTGGAA CGTGACCGCG AGGCGGCACT GGTTACCTTC
CTGGTCACCG CCTCCGGGGT CAGCCTGGCC GGCATCGGCT CGGCGTTCTG GGGGCTGGTG
GCCGGAGCCC TGTGCCTGCT GGTACTGCGG CCACGCCAGG CCGGCTGA
 
Protein sequence
MNMQVRRVWW RDLSMPAIVA GFITVLVGFA SSAVIVFQAA QAVGADQAQI ASWMWALGLG 
MGVTCIGLSL RYRVPVVTAW STPGAAMLVV GAGGASLSEA TGAFLLAAVL GMLAGFSGIF
ARLMQRVPMA LAAGMLAGVL LRFGLDVFVA MNTQLVLALA MFATWLAGRR LFPRYAVIAT
LAVGIAVAAS RGLLHAQQVQ LQLAVPQWIT PSLSWTAVAG IALPLFVVTM ASQNIPGVAV
MRASGYEAPV SPLIGWIGVV NTLLAPFGAY ALNLAAITAA ICMGRDAHED PARRYTAAMA
AGAFYIVIGL FGATVAALFA AFPKELVACV AGIALFGTIG NSLASALAVE RDREAALVTF
LVTASGVSLA GIGSAFWGLV AGALCLLVLR PRQAG