Gene Smal_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3956 
Symbol 
ID6474840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4450454 
End bp4451707 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content72% 
IMG OID642733159 
Productouter membrane efflux protein 
Protein accessionYP_002030338 
Protein GI194367728 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCC TGACACCTCG GTCGCCGCGC GCGGCCGGGC TGGTCGTCGC TGTACTGCTG 
GGCCTTGCCC CGGCAATGCA GGCGTCGGCG CAAGCCGCCC CTTCCTACGA CACCCTGCTT
GAACGCCTCG ACCAGTTGCC CGGCACCCGT GTCGGCGCGG CGCTGGCCGA AGCCGCCGAT
GCCCGTGCCG ACCAGGCCCG TGCGTTGCCC AATCCTTCCC TCTCCTACTC CGCCGAGAAC
GCGTGGGGCA CCGGCTCCTA TGGCGGCATG GGCAAGGCCG ATACCGTGCT CACCCTGTCC
CAGCCCCTGG AGGTATGGGG CCAGCGCGGC GCGCGCGTCC GTGCCGCCCG CGCCGAGGCA
CAGGCGGCCA ACCTGCGTGG CGCCCAAAGC CGCAGCGATG TGGCCAGCCA GTTGGCGGTG
GTCTATGCAC AGGCGGAAAG TGCATTGCGC CGCTACAGCC TGGCCGAAGA GGCACTGACC
CTCACCCGCG ACGACGCCAA CGCCGTCAAC GCGATGGTCA AGCAGGGCCG CGAGCCGCAG
CTGCGTGCGG TGCAGGCGCA GAGCGAAGTG GCCAACGCCA GCGCCGCGCT GGATGAGGCA
CAGGCCTTCC GCGACGCCGC ACTGGCCCGC CTGGCTGGCG CCGCGCTGCT GGATGCACCG
GTGCAGTCGA TCGACAACAG CCTGCTCGAC CGTGCTCCGC CGCTGCCGCG TGGCGCCACC
GATGCCGCGC TGGCGGTGCG CATCGCCGAG GCCGAAGCCG ATGCAGCGGG CAAGCTGGTC
GATGTGGAGC GCAAGCGCGC CCTGCCCGAC CTCAGCGTCA CTGCCGCACA GACACGCTTC
CGCGAGGGCG GCGAGCGCGC CTACAACCTC GGGGTCAGCC TCAGCATCCC GCTGTTCGAC
CGTAACCGCG GTGGCATCCG CGCCGCCAAT GCCGACCAGC GCGCGGCCGA AGCCCGTCTG
GACCAGCAAC GCCGTGACAG CGAGGCCGCG CGCCTCTCCG CCGTGGCTGG ACTGAAGGCC
GCCGGCAGCC GCACCCGTGC CTCCGACGAA AGCGTGGTCG CTGCCGAGGA GGCGTATCGG
CTGGCCCGGG TCGGCTTCGA CGCAGGACGC ATCTCGCAGC TGGAACTGCG CAGCACGCGC
AGCGCCCTCA TCGCCGCCCG CGGCACCGCC GTGGACGCAC GCCTGTCGCG CGTCGGCGCC
GAAATCGATC TTGCGCGCCT TGAAGGGCGC GCCCCCTTTG TGGAGGCCCC ATGA
 
Protein sequence
MSILTPRSPR AAGLVVAVLL GLAPAMQASA QAAPSYDTLL ERLDQLPGTR VGAALAEAAD 
ARADQARALP NPSLSYSAEN AWGTGSYGGM GKADTVLTLS QPLEVWGQRG ARVRAARAEA
QAANLRGAQS RSDVASQLAV VYAQAESALR RYSLAEEALT LTRDDANAVN AMVKQGREPQ
LRAVQAQSEV ANASAALDEA QAFRDAALAR LAGAALLDAP VQSIDNSLLD RAPPLPRGAT
DAALAVRIAE AEADAAGKLV DVERKRALPD LSVTAAQTRF REGGERAYNL GVSLSIPLFD
RNRGGIRAAN ADQRAAEARL DQQRRDSEAA RLSAVAGLKA AGSRTRASDE SVVAAEEAYR
LARVGFDAGR ISQLELRSTR SALIAARGTA VDARLSRVGA EIDLARLEGR APFVEAP