Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3956 |
Symbol | |
ID | 6474840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4450454 |
End bp | 4451707 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642733159 |
Product | outer membrane efflux protein |
Protein accession | YP_002030338 |
Protein GI | 194367728 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCC TGACACCTCG GTCGCCGCGC GCGGCCGGGC TGGTCGTCGC TGTACTGCTG GGCCTTGCCC CGGCAATGCA GGCGTCGGCG CAAGCCGCCC CTTCCTACGA CACCCTGCTT GAACGCCTCG ACCAGTTGCC CGGCACCCGT GTCGGCGCGG CGCTGGCCGA AGCCGCCGAT GCCCGTGCCG ACCAGGCCCG TGCGTTGCCC AATCCTTCCC TCTCCTACTC CGCCGAGAAC GCGTGGGGCA CCGGCTCCTA TGGCGGCATG GGCAAGGCCG ATACCGTGCT CACCCTGTCC CAGCCCCTGG AGGTATGGGG CCAGCGCGGC GCGCGCGTCC GTGCCGCCCG CGCCGAGGCA CAGGCGGCCA ACCTGCGTGG CGCCCAAAGC CGCAGCGATG TGGCCAGCCA GTTGGCGGTG GTCTATGCAC AGGCGGAAAG TGCATTGCGC CGCTACAGCC TGGCCGAAGA GGCACTGACC CTCACCCGCG ACGACGCCAA CGCCGTCAAC GCGATGGTCA AGCAGGGCCG CGAGCCGCAG CTGCGTGCGG TGCAGGCGCA GAGCGAAGTG GCCAACGCCA GCGCCGCGCT GGATGAGGCA CAGGCCTTCC GCGACGCCGC ACTGGCCCGC CTGGCTGGCG CCGCGCTGCT GGATGCACCG GTGCAGTCGA TCGACAACAG CCTGCTCGAC CGTGCTCCGC CGCTGCCGCG TGGCGCCACC GATGCCGCGC TGGCGGTGCG CATCGCCGAG GCCGAAGCCG ATGCAGCGGG CAAGCTGGTC GATGTGGAGC GCAAGCGCGC CCTGCCCGAC CTCAGCGTCA CTGCCGCACA GACACGCTTC CGCGAGGGCG GCGAGCGCGC CTACAACCTC GGGGTCAGCC TCAGCATCCC GCTGTTCGAC CGTAACCGCG GTGGCATCCG CGCCGCCAAT GCCGACCAGC GCGCGGCCGA AGCCCGTCTG GACCAGCAAC GCCGTGACAG CGAGGCCGCG CGCCTCTCCG CCGTGGCTGG ACTGAAGGCC GCCGGCAGCC GCACCCGTGC CTCCGACGAA AGCGTGGTCG CTGCCGAGGA GGCGTATCGG CTGGCCCGGG TCGGCTTCGA CGCAGGACGC ATCTCGCAGC TGGAACTGCG CAGCACGCGC AGCGCCCTCA TCGCCGCCCG CGGCACCGCC GTGGACGCAC GCCTGTCGCG CGTCGGCGCC GAAATCGATC TTGCGCGCCT TGAAGGGCGC GCCCCCTTTG TGGAGGCCCC ATGA
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Protein sequence | MSILTPRSPR AAGLVVAVLL GLAPAMQASA QAAPSYDTLL ERLDQLPGTR VGAALAEAAD ARADQARALP NPSLSYSAEN AWGTGSYGGM GKADTVLTLS QPLEVWGQRG ARVRAARAEA QAANLRGAQS RSDVASQLAV VYAQAESALR RYSLAEEALT LTRDDANAVN AMVKQGREPQ LRAVQAQSEV ANASAALDEA QAFRDAALAR LAGAALLDAP VQSIDNSLLD RAPPLPRGAT DAALAVRIAE AEADAAGKLV DVERKRALPD LSVTAAQTRF REGGERAYNL GVSLSIPLFD RNRGGIRAAN ADQRAAEARL DQQRRDSEAA RLSAVAGLKA AGSRTRASDE SVVAAEEAYR LARVGFDAGR ISQLELRSTR SALIAARGTA VDARLSRVGA EIDLARLEGR APFVEAP
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