Gene Smal_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3952 
Symbol 
ID6474836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4447541 
End bp4448050 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID642733155 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_002030334 
Protein GI194367724 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA TCGTCGCACT GGATACCGAA ACCACCGGCA TCTCCCACCG CCTGGGGCAC 
CGGGTCATCG AAATCGGTGC CGTCGAACTG ATCGATGGCC AGCTGACCGG TCGCCAGTTC
CACACCTACC TGCAGCCGCA GCGCAAGGTG GACTGGGGCG CGCAGCGCGT GCACGGCATC
AGCGACGCGA TGCTGGTGGG CAAGCCGCTG TTCTCCAGCA AGGCTGCCGA ACTGCTGGAT
TTCCTGCGCG GCAGCGAGAT GGTCGCGCAC AACGCCACCT TCGATGTCGG CTTCCTGGAC
AACGAGCTGC GCCTGGCGGG CATCCCCGGC ACGCTGGCCC AGCATTGCCG CATTACCTGC
AGCTTGAAGC TGGCGCGTGG GCGTTGGCCG GGCCAGGGCA ACAAGCTGGA CGATGTGCTG
CAGCGCCTGC GCATCCCGGG TAACCGTGGC CTGCACGGCG CGTTGAAGGA TGCCCATCTG
CTGGCCCAGG TGATTCCGCA CCTGCGTTGA
 
Protein sequence
MSRIVALDTE TTGISHRLGH RVIEIGAVEL IDGQLTGRQF HTYLQPQRKV DWGAQRVHGI 
SDAMLVGKPL FSSKAAELLD FLRGSEMVAH NATFDVGFLD NELRLAGIPG TLAQHCRITC
SLKLARGRWP GQGNKLDDVL QRLRIPGNRG LHGALKDAHL LAQVIPHLR