Gene Smal_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3884 
Symbol 
ID6474767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4372405 
End bp4373295 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID642733086 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002030266 
Protein GI194367656 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.841243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.708537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA GCGCCCTGCC CACACGGATG TTGATCCTCG GCATGGGCTG GAGCGGATGC 
GTGCTGGCCA CGCATCTGCA GGCGTTGGGC GTACGTGTGG TCGGCACGGT GCGCGACCCC
GCGTCGGCAC CGCACGATGG GCTGCTGCGC CATCAGCTAC GCGCCGACGC CACGCCATCG
ACGGCCCTGC TTGATGAGAT CGCGCAGGCC GAGGCCGTGC TGTGCAGCGT GCCGCCCGAC
GCCGAGGGTG ACCCGGCGCT GAGTCTGCTG CTGCCGGCAC TGCAGGAAAG TCCGGCACTT
CGCTGGGTGG GCTATCTGTC ATCCACGTCG GTCTATGCCG ATCGGGCCGG CGGCTGGATC
AACGAAACCA GCGTGGCCGA TGCCACTGAA ACGACCGGCA TGCAACGCAG ACGCGCCGAG
GACCAGTGGC GTGCGCTGGC GGAGCAGCGC GGTATCGCCT CGGCAGTATT CCGCCTGCCC
GGACTGTATG GACCGGGGCG CAATGCGCTG CTGCAGCTGG CGCAGGGACG TGCGCGCCAC
GTAGTGCGTC CTGGGCTGGT ATTCAACCGC CTGCACGTGC AGGATCTGGC GGCGGTGATC
ATCGCCGCGA TGCGGCGACC CGCCTTGAAT GGCCTGTACC TGCCCAGCGA CGACGAACCC
GCACCGCCGC AGGATGTGCT CGCATATGCC GCGCAGCTGG GCGGCTTCGC GATGCCGCCT
GCAATGGCGT GGGATGACCC GGCAGTAAGC CCGACGCTGC GGCGCTTCTA CGAGAGCAGC
AAGCGCATCG ACAGCACCGG TACGCGCGGG GCACTGGGCT GGGAGCCGAG CTTCCCGACG
TATCGGGAAG GGCTGCGGGC GCTGGCCGCT TCGCAACCTT GCGGCATCTG A
 
Protein sequence
MQASALPTRM LILGMGWSGC VLATHLQALG VRVVGTVRDP ASAPHDGLLR HQLRADATPS 
TALLDEIAQA EAVLCSVPPD AEGDPALSLL LPALQESPAL RWVGYLSSTS VYADRAGGWI
NETSVADATE TTGMQRRRAE DQWRALAEQR GIASAVFRLP GLYGPGRNAL LQLAQGRARH
VVRPGLVFNR LHVQDLAAVI IAAMRRPALN GLYLPSDDEP APPQDVLAYA AQLGGFAMPP
AMAWDDPAVS PTLRRFYESS KRIDSTGTRG ALGWEPSFPT YREGLRALAA SQPCGI