Gene Smal_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3843 
Symbol 
ID6474726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4329472 
End bp4330161 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID642733045 
ProductRDD domain containing protein 
Protein accessionYP_002030225 
Protein GI194367615 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC CGATGCTCGA TACCTACCGC GAGGTGGTGA CGCCGGAGGG TGTGCCGCTG 
CAGTTGCCGG CGGCCGGTCC GGTGCCGCGG GCGATGGCCT GGCTGGTCGA TCTTGGCGTG
CGCATCGCGG TGCTGGTGCT GATGTCGTTC CCGCTGGCGC TGCTGGACAA GTTCGGCACC
GGGCTCTACC TGGCGCTGAT GTTCCTGGTC TACTGGGCCT ACCCGATCAT CTGCGAAGCG
CTGTGGGGCC GCACCCTGGG CAAGCGTGCG CTGGGCCTGC GCGTGCTCGC CCGCGATGGC
GCGCCAGTGG GCTGGATGGC CGCGGTCACC CGCAACCTGC TGCGCACCGT GGACATGCTG
CCGTTCGGCT ATGCACTGGG CCTGATCAGC AGCCTGTTTG ATCCGCATGG CCGCCGCCTC
GGTGACCTGG TGGCAGGCAC CGTGGTGGTG CACGCACCGG CGCTGTACCT GCCGCCACCG
CCGACCATCG ACAGCGTGCT GGCTCCGCCA CAACCGTTGC GGCCGGAAGA GCAGGCCGCG
CTGATGGCCT TTGCCGAGCG CGCACCTCGA CTGTCGCCGG CGCGCCAGCA GGAGCTGGCC
GGCATCGCCG AACCGCTGAC CGGTACCCAC GGCCAGATCG GTGTGCTGCG CCTGTACGCG
ATGGCCAACT GGCTGCTGGG ACGGCGATGA
 
Protein sequence
MAAPMLDTYR EVVTPEGVPL QLPAAGPVPR AMAWLVDLGV RIAVLVLMSF PLALLDKFGT 
GLYLALMFLV YWAYPIICEA LWGRTLGKRA LGLRVLARDG APVGWMAAVT RNLLRTVDML
PFGYALGLIS SLFDPHGRRL GDLVAGTVVV HAPALYLPPP PTIDSVLAPP QPLRPEEQAA
LMAFAERAPR LSPARQQELA GIAEPLTGTH GQIGVLRLYA MANWLLGRR