| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3818 |
|---|
| Symbol | |
|---|
| ID | 6474701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4300248 |
|---|
| End bp | 4301024 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642733020 |
|---|
| Product | DNA-binding transcriptional regulator AgaR |
|---|
| Protein accession | YP_002030200 |
|---|
| Protein GI | 194367590 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.892973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAACA CCCGCTCCCG CCGGCAACAG ATCCTGCAGC TGCTGATCGA GCACGGCTCG
GTGCAGGTGG CCGATCTGGT CGAGCGCTTC GGCGTGTCGG CGGTGACCAT CCGTGCCGAC
CTGACCCACT TCGAGTCGCA GGGCCTTGCC AACCGCACCC ACGGCGGCGC CACCCTGGTA
CGCACGCCGC CACAGGAACA GGACATCCAC GAGAAGGACG CGCTGAACCT GCCGCTGAAG
GAATCGATCG GTGCGCGCGC CGCGCGCCTG GTACAGCCCG GCGACAACAT CATCATCGAT
TCCGGCTCGA CCACGATGAC CTTGGCCCGC CACCTGCGCG CGCATCGCGA TGTAACGGTG
ATGACCAACG GCCTGAACAT CGCCTGGGAA CTGGCCAATG CGGCCGGCAT CACCGTGCTG
CTGACCGGTG GTCTGCTGCG CCAGCAGTCG CTGTCGCTGC AGGGCAGCCA GGCCGAAGCC
AGCCTCAACT CGTACAGCTT CGACACCCTG TTCCTGGGCG TGGATGGCCT GGACCTGCAG
TTCGGCCTGA CCACCCACGA TGAAGCCGAA GCCCGCCTCA ACCACCGCAT GGTCGAGCGC
GCACGCCGTA TCGTGGTGCT GACCGACGCC TCCAAATTCG GCCGCGTCAG CCTGCACCGC
ATCGCCCTGC TGGATCAGAT CCACGCCATC ATCACCGACG CCGGCATTGA CGACGCAACC
CGTGAGGGGC TGCAACGGCT GGGCATCGAA GTGATCATCG CCGAGCCCGC CGCATGA
|
|---|
| Protein sequence | MRNTRSRRQQ ILQLLIEHGS VQVADLVERF GVSAVTIRAD LTHFESQGLA NRTHGGATLV
RTPPQEQDIH EKDALNLPLK ESIGARAARL VQPGDNIIID SGSTTMTLAR HLRAHRDVTV
MTNGLNIAWE LANAAGITVL LTGGLLRQQS LSLQGSQAEA SLNSYSFDTL FLGVDGLDLQ
FGLTTHDEAE ARLNHRMVER ARRIVVLTDA SKFGRVSLHR IALLDQIHAI ITDAGIDDAT
REGLQRLGIE VIIAEPAA
|
|---|
| |