Gene Smal_3801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3801 
Symbol 
ID6474683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4274813 
End bp4277215 
Gene Length2403 bp 
Protein Length800 aa 
Translation table11 
GC content67% 
IMG OID642733002 
ProductTonB-dependent receptor 
Protein accessionYP_002030183 
Protein GI194367573 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCGTT CGAAGCTTTC GCGTTCCATC CTCCTTGCCC TTTCCATGGC CAGCGCAGGA 
GGCGCGATCG CAGCGGAGGC CGATGCGGTC GATGCCGCGG GCAGCAGCCG TGCGGCGCCC
ACCCAGCTCG ACGCGATGCT GGTCACCGGC ACCCGCGCCT CCAACCGCAC CCAGTTCGAA
ACGCTGGCGC CGGTGGACGT GTTCACCAAG GAAGACATCA AGTCCGTCGA GTCGACCGAT
CTGAAGGACG TGCTGGCGCA ACTGGTGCCG TCGTTCGTGG TGCAGCGCCT GCCGATGGCC
GATGGCCAGG TGTTCGTGCG CCCGGCCACG CTGCGTGGGC TGTCGCCGGA CCAGACGCTG
GTGCTGGTCA ATGGCCGCCG CTTCCATCGC AGTGCCTTGC TGGGCAACCG CGGCGCACAG
GCCGCCGACC TGGCGCAGAT TCCGACCAGC GCCATCAAGC GCATCGAAGT GCTGCGCGAT
GGCGCGTCGG CGCAGTACGG CTCGGATGCC ATCGCCGGTG TCATCAACAT CATCCTGGAG
GACAGCCCCG GCACCGAGAT CACTGCGGGC TATTCGCAGT ACGCGCAGGG CGACGGCGGC
TCGCGCGACT TCAGTGCGCG TACCGGCTGG GCGCTGGGCG ACTACGGCAG CCTCGCCCTG
TTCGCCGAAT CGTCGAACTC CGACGCGACC TCACGCACGC GCCAGCGTCC CGACGCCATC
GCCTTCCAGG CCGCGCATCC CGAACTGGAC GTGCCCAACC CGGTACAGCG CTGGGGCCAG
CCGGAGCTGG AAAGCCGCCG CGTGGGCTTC AACCTGAAGG CCAATGCCAG CGACACCCTG
GAGTTGTATG TCTTCGGCCT GTACAGCCAC AGCGACGGCG TCAGCGATTT CAACTGGCGC
AACCCCGATA CCACCACCGG CGCGTACCGT ACGACCAGTA TCTTCCCGGG CTGGAACCTG
CGCTCGCTGT ATCCGGTGGG CTTCAGCCCG CAGTACGGCA ACACCCAGAA CGACCTGCAG
CTGGTCGCGG GCCTGCGTGG TGAGATCACG CCCAAGCTGC GCTGGGACCT GAGCGCCTCG
TATGGCCGCA ATGCCATCGA CTACAGCCTG GACAACTCCA TCAACGCCTC GCTGGGCCCG
GACAGCCCGA CCTCCTTCGA CCTCGGCCGG CTGACCCAGA CCGAGAAGAA CGCCAATGCG
GACTTCAACT ACGAATGGGA TGTGGCTGCG CTGCCGAAGC CGGTCAACAT CGCCTTCGGT
GCCGAGTTCC GCCAGGAGAC CTACCAGGTG CGCGCCGGCG ACCCGGCCTC GTATGCGGTG
GGTCGTGGCG CTGCGGCGGG CCTGGAAGCC AATTCCAACG GCGCGCCGGG CTTCTCGGCC
AGCCAGGCCG GGCAGTGGAG CCAGCGCAGC AAGGCCGCCT ACGTGGACAT GGAAGTGCCA
CTGGGCGAGC GCTGGAGCAT CGGCGCGGCC GGTCGCTATG AAGACTTCTC CAGCTTCGGC
AGCACGGTGG ATGGCAAGCT GTCGGCACGT TTTGCGATCA CCCCGGACGT GGCGCTGCGC
GGCACGCTCT CCACCGGCTT CCGCGCGCCC ACGCCGGCCC AGCTCAACAC CACCAGCACC
ACCCAGGGCC TGGACACGCG CACGCTGCAG ATCTTCACCA GTGGCCGCCT GTCGCCCAGC
GATCCGTTGG CGCAGCTGCT GGGTGCCAAG CCGCTGACCC CGGAAGAATC GCGCACGGCC
TCGCTGGGCC TGACCTGGCG CACCGACCTG GGCCTGTCCG GGTCGGTCGA TGTCTACCGG
ATCACGCTCA GCGACCGCTT CAGCCAGTCG GCCAGCTTCG CCATTCCGGC CGGCACGCCG
AATCCGCTGG GCTATACCTC GGTGAACTAC TTCACCAACG ATTTCGACAC CACCACCACC
GGCGTGGATG TGGTCGGCAA CTACCTGCGC GACCTCGGCG CGGGGCGGAT GACGCTGACC
CTGGCTTACA ACTACAACCA GACCCGCGTT GACAACGGCA GCACCTCGGT GGCCACGAAC
GAAACCCAGC GCGTGCTGTT CGAAGACCGC CTGCCCGAGC ACAAGGGCAG CTTCACCGGC
AGCTGGGACA TCGGCGCGTG GTCGTTGATG GCACGCGTGC GCTATTACGG CAAGTGGACC
GACTCCACCG GCAATGCCAC CGGCGATATC TACCAGCAGT TCGGTGCGAT GACCTTCCTC
GACCTGGCCG TGGGCTATCG CATCAACGAA CACCACAGCC TGAGCGTGGG CGCCGACAAC
GTGTTCGACC GCTACCCGGA CGAAGCCACG TTCCAGGCCA GCCGTGGCCT GATCTATTCG
CGCAACGCGC CGTACGATAC CGATGGTGCC AATGTGTACG CGCAGTACCG GCTGAGCTTC
TGA
 
Protein sequence
MHRSKLSRSI LLALSMASAG GAIAAEADAV DAAGSSRAAP TQLDAMLVTG TRASNRTQFE 
TLAPVDVFTK EDIKSVESTD LKDVLAQLVP SFVVQRLPMA DGQVFVRPAT LRGLSPDQTL
VLVNGRRFHR SALLGNRGAQ AADLAQIPTS AIKRIEVLRD GASAQYGSDA IAGVINIILE
DSPGTEITAG YSQYAQGDGG SRDFSARTGW ALGDYGSLAL FAESSNSDAT SRTRQRPDAI
AFQAAHPELD VPNPVQRWGQ PELESRRVGF NLKANASDTL ELYVFGLYSH SDGVSDFNWR
NPDTTTGAYR TTSIFPGWNL RSLYPVGFSP QYGNTQNDLQ LVAGLRGEIT PKLRWDLSAS
YGRNAIDYSL DNSINASLGP DSPTSFDLGR LTQTEKNANA DFNYEWDVAA LPKPVNIAFG
AEFRQETYQV RAGDPASYAV GRGAAAGLEA NSNGAPGFSA SQAGQWSQRS KAAYVDMEVP
LGERWSIGAA GRYEDFSSFG STVDGKLSAR FAITPDVALR GTLSTGFRAP TPAQLNTTST
TQGLDTRTLQ IFTSGRLSPS DPLAQLLGAK PLTPEESRTA SLGLTWRTDL GLSGSVDVYR
ITLSDRFSQS ASFAIPAGTP NPLGYTSVNY FTNDFDTTTT GVDVVGNYLR DLGAGRMTLT
LAYNYNQTRV DNGSTSVATN ETQRVLFEDR LPEHKGSFTG SWDIGAWSLM ARVRYYGKWT
DSTGNATGDI YQQFGAMTFL DLAVGYRINE HHSLSVGADN VFDRYPDEAT FQASRGLIYS
RNAPYDTDGA NVYAQYRLSF