Gene Smal_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3788 
Symbol 
ID6474670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4261473 
End bp4261913 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID642732989 
Producthypothetical protein 
Protein accessionYP_002030170 
Protein GI194367560 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.15952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACC CTCTGGCCCA GGCCCATCGC GGCCTCGGCA CCACGCTGTT CAGCCTGTTG 
AACCCGATAC CCTTCGGCTT CTTCGTCGGC GCGCTGATCT TCGACGCGAT CTACCTCAAC
AGCGCCGAGG TGATGTGGGG CAAGTCCGCC GCCTGGCTGA TCACCTTCGG CCTGCTGATC
GCCATCATTC CGCGCCTGAT CAACCTGTTC GCGGTCTGGC GCCGCAACGG CACCGCCACC
CGCATCGACC GCATCGACTT CTTCCTCAAC CTGGTCGCGG TGCTGCTGGC CATCTGGAAC
GCCTTCGTGC ACAGCCGCGA TGCGTATGCC GTCGCGGTGC CGGGCACGAT CCTGTCGGCG
CTGACCGTGG CCCTGATCGC CCTGGGCCTG ATCCTGCTGT CGCTGCAGCC GCCGGTGCTG
CAGGGAGGTC GTCATGGCTA A
 
Protein sequence
MVNPLAQAHR GLGTTLFSLL NPIPFGFFVG ALIFDAIYLN SAEVMWGKSA AWLITFGLLI 
AIIPRLINLF AVWRRNGTAT RIDRIDFFLN LVAVLLAIWN AFVHSRDAYA VAVPGTILSA
LTVALIALGL ILLSLQPPVL QGGRHG