Gene Smal_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3538 
Symbol 
ID6474417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3980443 
End bp3981336 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID642732736 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002029920 
Protein GI194367310 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.838406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC TGTTGACCGG CAGTTCCGGG CGGATCGGGC GTGCGATCTT CGGCGCCCTG 
GCCGCTGCCC ATGAAGTGGT GGGGCTGGAT CGCAGCCCGT TCGCAACGAC GCGCATCATC
GCCGATGTCA CCGATCATCA GGCGGTCGTA CGCGCGGTGC AGGGTGTCGA CGCGGTGATC
CACACCGCCG CCCTGCATGC GCCGCACGTG GGCCTGGTGC CGGATGCGGT GTTCCAGCAG
ATCAACGTGG ATGCGACCCG GCACCTGCTG GCGGCGGCCC GGGAGGCCGG TGCCCGTCGC
TTCGTGCTGA CCAGTACCAC CGCGCTGTAC GGCCATGCGG TGGTGGCTGG TGGGTGCCGC
TGGATCGATG AAGACACCGA GCCGCTGCCA CGCACCATCT ACCACCGCAG CAAGCTGCAG
GCCGAGGCGC TGGCCGAAGC GGCGGCGAGC GCGGACTTCA GTGTGCGTGT ACTGCGCATG
GGTCGCTGCT TTCCGGAGCC GCCCGAGCGT ATGGCGATGT TCCGCCTGCA TCGCGGCATC
GACGCACGGG ATGTCGCCAG TGCGCATGCC GCGCTGCTGC ACGATGAGGG CGCTGCCTTC
GCGCGCTACA TTGCCTGCGC ACCCACACCG TTCCTGCGCG AGGATTGCCT TGAGCTGGCG
ACCCAACCGC GCAGGGTGCT GGCCCGGCGT GCGCCGCAGC TGCTGGCCGA GTTCGAACGC
CGGGGCTGGC CGTTGCCGCT GAGCATCGAC CGCGTCTACG ACAGCGCGCG CCTCCGCAGC
CTGCTGGGCT GGCAACCGCG CTTCGGCCCC GATGACGTGC TGCAGCAGTA CGCCGCCGGC
AGCATCGAGG TGTTGCCGAG GGCGCAGTGG ATCAAGGACC GCGTGGCCGA ATGA
 
Protein sequence
MKILLTGSSG RIGRAIFGAL AAAHEVVGLD RSPFATTRII ADVTDHQAVV RAVQGVDAVI 
HTAALHAPHV GLVPDAVFQQ INVDATRHLL AAAREAGARR FVLTSTTALY GHAVVAGGCR
WIDEDTEPLP RTIYHRSKLQ AEALAEAAAS ADFSVRVLRM GRCFPEPPER MAMFRLHRGI
DARDVASAHA ALLHDEGAAF ARYIACAPTP FLREDCLELA TQPRRVLARR APQLLAEFER
RGWPLPLSID RVYDSARLRS LLGWQPRFGP DDVLQQYAAG SIEVLPRAQW IKDRVAE