Gene Smal_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3369 
Symbol 
ID6476579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3791189 
End bp3791968 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID642732567 
Productpolysaccharide deacetylase 
Protein accessionYP_002029751 
Protein GI194367141 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.792887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CAGGAACATT GCATCGCATC CCGGCCCGCC CCTGGCGCTG GCTGCCTTGG 
CTGGTGGCGT CGCAGCTGGT CGTGATCCTG GTATGGGGGC TGGCCGGTTG GTATTGGGGC
CTGCCGCTGA TGGTGGCCAG CCATGCGCTG TTCATGGTGC CGGTGTTCCT GCCCAACAGC
CGCTTCTATG CGCCGGTGCT GAGCCGGGTT CCGGATGCTG GCAACACGGT CTGGCTCACC
ATTGATGACG GTCCCGGCCC GGAAACCCGT GCCGTGCTCG ACCTGCTGGA CCGCCACCAG
GCACGTGCGA CCTTCTTCCT GGTGGGGGAA CGAGCGCTGG CGCAGCCGGA ACTGGTGACC
GAGATCCTGC GCCGTGGCCA CGACCTGGGC AATCACAGCC ACAGCCACCC GCAGGCGCGC
TTCTGGCGGC TGGGCCCGGC CGCGATGCGC GCCGAGATCG AGGGCTGCCA GCACGCACTG
CAGGCGCTGG GTGGCCAGCC GGTGCGCTGG TACCGCTCGG TGGTGGGCAT GACCAATCCG
TTCGTAGCGC CGGTGCTGCA GCGGTTGGGC CTGGTCCGGG TGGGCTGGAG CGCGCGCGGC
TTCGACGGGG TCGGCTGCAC GCCGGATGGC GTGCTGGCAC GGCTGCTGCC GGACCTGCGC
CCGGGCGCCA TCGTGCTGCT GCATGAAGGT GCGGTGCACG GCCACAACCT GGCCATCATC
GAGCGCGTGC TGCAGGCGTT GGACGAGCGT GGGTTGAAGG CGCAGCTGCC GGCCGGATAA
 
Protein sequence
MSNTGTLHRI PARPWRWLPW LVASQLVVIL VWGLAGWYWG LPLMVASHAL FMVPVFLPNS 
RFYAPVLSRV PDAGNTVWLT IDDGPGPETR AVLDLLDRHQ ARATFFLVGE RALAQPELVT
EILRRGHDLG NHSHSHPQAR FWRLGPAAMR AEIEGCQHAL QALGGQPVRW YRSVVGMTNP
FVAPVLQRLG LVRVGWSARG FDGVGCTPDG VLARLLPDLR PGAIVLLHEG AVHGHNLAII
ERVLQALDER GLKAQLPAG