Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3369 |
Symbol | |
ID | 6476579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3791189 |
End bp | 3791968 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642732567 |
Product | polysaccharide deacetylase |
Protein accession | YP_002029751 |
Protein GI | 194367141 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.792887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CAGGAACATT GCATCGCATC CCGGCCCGCC CCTGGCGCTG GCTGCCTTGG CTGGTGGCGT CGCAGCTGGT CGTGATCCTG GTATGGGGGC TGGCCGGTTG GTATTGGGGC CTGCCGCTGA TGGTGGCCAG CCATGCGCTG TTCATGGTGC CGGTGTTCCT GCCCAACAGC CGCTTCTATG CGCCGGTGCT GAGCCGGGTT CCGGATGCTG GCAACACGGT CTGGCTCACC ATTGATGACG GTCCCGGCCC GGAAACCCGT GCCGTGCTCG ACCTGCTGGA CCGCCACCAG GCACGTGCGA CCTTCTTCCT GGTGGGGGAA CGAGCGCTGG CGCAGCCGGA ACTGGTGACC GAGATCCTGC GCCGTGGCCA CGACCTGGGC AATCACAGCC ACAGCCACCC GCAGGCGCGC TTCTGGCGGC TGGGCCCGGC CGCGATGCGC GCCGAGATCG AGGGCTGCCA GCACGCACTG CAGGCGCTGG GTGGCCAGCC GGTGCGCTGG TACCGCTCGG TGGTGGGCAT GACCAATCCG TTCGTAGCGC CGGTGCTGCA GCGGTTGGGC CTGGTCCGGG TGGGCTGGAG CGCGCGCGGC TTCGACGGGG TCGGCTGCAC GCCGGATGGC GTGCTGGCAC GGCTGCTGCC GGACCTGCGC CCGGGCGCCA TCGTGCTGCT GCATGAAGGT GCGGTGCACG GCCACAACCT GGCCATCATC GAGCGCGTGC TGCAGGCGTT GGACGAGCGT GGGTTGAAGG CGCAGCTGCC GGCCGGATAA
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Protein sequence | MSNTGTLHRI PARPWRWLPW LVASQLVVIL VWGLAGWYWG LPLMVASHAL FMVPVFLPNS RFYAPVLSRV PDAGNTVWLT IDDGPGPETR AVLDLLDRHQ ARATFFLVGE RALAQPELVT EILRRGHDLG NHSHSHPQAR FWRLGPAAMR AEIEGCQHAL QALGGQPVRW YRSVVGMTNP FVAPVLQRLG LVRVGWSARG FDGVGCTPDG VLARLLPDLR PGAIVLLHEG AVHGHNLAII ERVLQALDER GLKAQLPAG
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