| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3192 |
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| Symbol | |
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| ID | 6476164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 3573423 |
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| End bp | 3575270 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642732389 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_002029574 |
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| Protein GI | 194366964 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.213915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCG CGCTGACGCT GACCACTGAC ATGAAGCTCG TGCTCGGGCT GGTCGGCTTC
ACGATGGCGA TGTTCCTGTT CGAGCGCATC CGCGCCGACG TGGTTGCGCT GGTGGTGCTG
GTGGTACTGG GCGTGACCGG CCTGATCGCG CCAGAGGAGA TCTTCGGCGG TTTCTCCGGT
AACGCGGTGA TGAGCATCAT CGCCACCACC ATCCTCGGCG CAGGCCTGGA CCGCACCGGG
GCGTTGAACC GGCTCGCCGC CTGGCTGCTG CGCCGTGGCC ACGGCGTGGA GCAGCGGTTG
CTGATGATGA CCACGGCCAT CGCCGGCCTG AACTCGTCCT TCATGCAGAA CCCGTCCGTG
ATGGCGCTGT ACCTGCCGGT GGCCTCGCGG CTGGCGGCGC GCACGGGCCT GACCATGCAG
CGGCTGCTGC TGCCGATTTC GGCGGCGATC GTGATGGGTG GCGCGCTGAC CATGGTCGGC
AACTCGCCAC TGATCCTGCT GAACGATCTG CTGGCCTCGG CCAACAACAA CCTGCCCTCG
GGCCTGGCCA CCATCGAACC ACTGCGCATG TTCGCGCCGC TGCCGATCGG CGTGGCGCTG
CTGATCGCTT CGCTGCTGTA CTTCCGCTAC TACGGCGACC GCAAGCTGGT GGAAGAGGAA
AGCCTGGTCA ACGACGGGGT CACTCCGGCG CGTACCGAAA GCTACTTCGC CAAGACCTAC
GGCATCGAAG GCGATGTGTT CGAGCTGGTG GTCAGTGCCG AAAGCCCGCT GGTCGGCATG
ACCCTGGGCG AGGCCGAGAA CCTGCACGAT GCACCGCTGC TGCTGGCGCT GAAAACCGGC
AACGACACCC GCCTGGCGCC GCCGGCGGAA ATGCGCATCT GGGTGGGCAG CGTGCTCGGC
GCGATGGGCC CGCGCGAGCA GATCAACGAC TTCGCGCAGA ACCAGTTCCT GCGCATGTCT
TCGCGGCTGA AGCATCTCGG CGACCTGTTC AACCCGAGCC GCGCCGGTAT TTCCGAGGCG
GTGGTGCCGC CAACCTCGAA CGTGATCGGC AAGAGCGCGG CCGACCTGCG CCTGCGCAAG
GAGCGCGGCA TCAGCCTGCT GGCGATCAAC CGCGACAAGC AGGTGATCCG CGAGGACGTG
CGCGACGTGC AGCTGCGCGC CGGCGACATG CTGGTCTTCC ACAGCATCTG GACCGACCTG
GCGCAGGCCG CCCGCAGCCG CGACTTCGTG GTGGTGACCG ACTACCCGAC CGGCGAGCAG
CGACCGCACA AGTTCAAGAT CGCGATGGCG ATCTTCGCCT TGACCATCCT GATCGCGCTG
ACCAGCAAGC TGCCGGTGGC ACTGACCCTG ATGACCGGCG TAGCCGGCAT GCTGCTGACC
GGCGTGCTGC GCATGGACGA GGCCTACGCC TCGATCAACT GGAAAACGGT GTTCATGATG
GCCGGGCTGA TCCCGCTCGG CTGGGCGATG GATTCCAGTG GCGCGGCGGC GTGGGTGGCC
GGCCATACCA TCGACAAGCT GCCCACTGGC ATCCCGGTAT GGGTGCTGGA AGTGGCGTTG
GCACTGCTGA CCACGGCGTT CTCGCTGGTG ATCAGCCATG TAGGCGCGAC CATCGTGATG
GTGCCCATTG CGGTGAACCT GGCACTGGCG GCGGGCGGCA ATCCGACGGC GTTCGCGCTG
ATCGTGGCGC TGTCGGCGTC CAACAATCTG ATGACGGCCT CCAACCCGGT GATTTCGATG
ATCACCGGCC CGGCCAACTA CACCCCGCGC GAGATGTGGC GGGTCGGCGG CCCGCTGTCG
CTGATCTACA CCTGCGTGGT GGTGCTGATG ATCAACCTGA TGTTCTGA
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| Protein sequence | MDTALTLTTD MKLVLGLVGF TMAMFLFERI RADVVALVVL VVLGVTGLIA PEEIFGGFSG
NAVMSIIATT ILGAGLDRTG ALNRLAAWLL RRGHGVEQRL LMMTTAIAGL NSSFMQNPSV
MALYLPVASR LAARTGLTMQ RLLLPISAAI VMGGALTMVG NSPLILLNDL LASANNNLPS
GLATIEPLRM FAPLPIGVAL LIASLLYFRY YGDRKLVEEE SLVNDGVTPA RTESYFAKTY
GIEGDVFELV VSAESPLVGM TLGEAENLHD APLLLALKTG NDTRLAPPAE MRIWVGSVLG
AMGPREQIND FAQNQFLRMS SRLKHLGDLF NPSRAGISEA VVPPTSNVIG KSAADLRLRK
ERGISLLAIN RDKQVIREDV RDVQLRAGDM LVFHSIWTDL AQAARSRDFV VVTDYPTGEQ
RPHKFKIAMA IFALTILIAL TSKLPVALTL MTGVAGMLLT GVLRMDEAYA SINWKTVFMM
AGLIPLGWAM DSSGAAAWVA GHTIDKLPTG IPVWVLEVAL ALLTTAFSLV ISHVGATIVM
VPIAVNLALA AGGNPTAFAL IVALSASNNL MTASNPVISM ITGPANYTPR EMWRVGGPLS
LIYTCVVVLM INLMF
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