Gene Smal_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3017 
Symbol 
ID6475834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3362350 
End bp3363345 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID642732212 
Productquinone oxidoreductase, YhdH/YhfP family 
Protein accessionYP_002029399 
Protein GI194366789 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.295678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCA CCACCCCGTT TACAGCCTTC CGCATCGAAA ATGACGATGC CGGTTACCGC 
GCCGGCCTGG CCCAGATCAC TGTCGACGAC CTCAACCCCG GCCAGGTGCT GATCCGCGCC
CAGTGGTCTT CGGTCAACTA CAAGGACGCG CTGGCGGGCA CCGGCAAGGG CAGGATCCTG
CGCCGCTTCC CGCTGGTCGG CGGGATCGAT GTGGCCGGCA CCGTGGTGGC ATCCACCGAC
CCGGCCTGGC GTGAAGGCGA TGCGGTACTG GCCACCGGCT GCGGCCTCAG CGAAACCCGG
GATGGGGGCT ACAGCCAGTA CGTGCGGCTG CAATCGAGCG CGGTGATCGC GCAGCCGGCC
GGGCTGAGCC CGCGCGAGGC GATGGTGCTG GGCACCGCCG GCTTCACGGC AGCGTTGGCC
CTGCTGCGCC TGCAAGACAA CCGGCAGACC CCGGAGCTCG GCCCGCTGGC AGTCACCGGC
GCCAGCGGCG GTGTGGGCGC GCTGGCGCTG TCCATCTTCA GCCGTGCCGG CTACACGGTG
CACGCGGTCA GCGGCAAGCC TGAGCAGTCG GACTTCCTGC GCGGCATCGG CGCCGCCGAG
GTGCTGCCAC GCTCGGCGTT GGCCGATACC GGCCCACTGC AATCGGCCCG CTTCGGCGGG
GGCCTCGACA ATGCCGGAGG CGACATGCTG GCCAGCCTGC TGGCGCAGAC CGTGCCCTAT
GGCAGCGTGG TCAGCGCCGG CCTCGCGGCG AGCCCGAAAC TGGACATGAC GGTGATGCCG
TTCATCCTGC GCGGCGTGTC ACTGCTGGGC GTGTCCTCGG CCAACGCACC GCGCGGGCTG
CGCGAAGCAG TGTGGGCGCG GCTGGGCAAT GAGTGGAAGC CGCAACACCT GGACCGCATC
TGTACCGCCG AAGTCGGCCT GGACGGCCTG CCGGCGGTGT TCGAGCGGAT GCTGGCCGGC
GGTTCGCTGG GCCGCACCGT GGTGCGGATC GACTGA
 
Protein sequence
MAPTTPFTAF RIENDDAGYR AGLAQITVDD LNPGQVLIRA QWSSVNYKDA LAGTGKGRIL 
RRFPLVGGID VAGTVVASTD PAWREGDAVL ATGCGLSETR DGGYSQYVRL QSSAVIAQPA
GLSPREAMVL GTAGFTAALA LLRLQDNRQT PELGPLAVTG ASGGVGALAL SIFSRAGYTV
HAVSGKPEQS DFLRGIGAAE VLPRSALADT GPLQSARFGG GLDNAGGDML ASLLAQTVPY
GSVVSAGLAA SPKLDMTVMP FILRGVSLLG VSSANAPRGL REAVWARLGN EWKPQHLDRI
CTAEVGLDGL PAVFERMLAG GSLGRTVVRI D