Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2764 |
Symbol | |
ID | 6477256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3084563 |
End bp | 3086893 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642731952 |
Product | TonB-dependent receptor |
Protein accession | YP_002029147 |
Protein GI | 194366537 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.700663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTCCC ATTCCGATTC CCGCCGTTCG TCGGGCATGT CGTCCTCCCT CGTTTCCTTC CGTCGCCATC CGCTGGCCCT GGCCTGTGCG GGCCTGGCGC TGGCTGCCAG CTTCGGTGCT GCCGCGCAGG ACAGTGCGCC GACCCCGACC GGGCTGGACA CCATCACCGT GACCGCCGAG CACCGTGAGC AGAACCTGCA GGAAGTGCCG GTGTCGGTGG GCGTGGTGCA GGGCGAGCGC ATGCGCGACT TCACCGCCGG CGGCGACGAC ACCCTGCTGG CGCTGTCCGG CCGCGTGCCG AGCCTGTATG CGGAAACCAC CACCGGTCGC ATCTTCCCGC GCTTCTACAT CCGTGGCCTG GGCAACATCG ACTTCTACCT GGGTGCTTCG CAGCCGGTGT CGATCATCCA GGACGACGTG GTGCTGGAGC ACGTGGTGCT GAAGTCCAAC CCGGTCTATG ACGTGGACCA GGTGGAAGTG CTGCGCGGTC CGCAGGGCTC GCTGTTCGGC CGCAACACCA CCGCCGGCAT CGTCAAGTTC GACACCCTCA AGCCGACCCA GGACTACAGC GGCCGCGTCA GCGCCAGCTA TGCCTCCTAC AACAGCGTGT CGATCGACGG TGGCTTCGGC GGCCCGATCA ACGACATCGC TTCGTTCCGC GTGTCGGCGC TGTACCAGCA CCGCGACGAC TACGTCGACA ACACCTACAC CGGCCCCAGT GCCGACGGCA CGGTCAGCCC GAAGAAGAAT GCCATGGGCG GCTTCGACGA CCGCAACGTG CGTGCACAGC TGCTGCTGAC CCCGGGCGAC CAGTTCTCGA TCCTCGCCTC GGCCCACGCC CGCGATTACG AAGGCACCTC GACCCTGTTC CTGCGCAACG CGCTGACCAA GGGCTCGAAC CAGACCGACG TACCGCGTGA CCAGGTCGCC TACGACGAGG CCGACAACAA CCCGCAGGCG TACAAGACCT ACGGCGGTTT GGTGAAGGCG CGCTATGACT TCGGCGCGGT CGATTTCACC TCGATCACCG CCTACGAAAC CACCTCCGGC TACAGCCGTG GTGACACAGA TGGCGGCGCT GCGGTCAACT TCCCGGTCAA TGGCGTGCCG AACGGCTACG GCCAGTCGAT GGGCCAGATC CGTGACCTGG ACCAGTGGAC CCAGGAGTTC CGCTTGGCCA GCCACGACGA CAGCGCCCTG CAGTGGCAGG CCGGTGCGTT CTACTTCAAC GGCAGCGACA CCACCGACTT CTACCAGCGC GCCTGGTTCC TGAAGGGTGC GGCGCGCAAC CCGAACAACT GGGTGCGCCT GCGCAACAAG AACACCTCCT GGGCCGGTTT CGGCCAGCTC AGCTACGCCT TCACCGACAA GTTCACCGTT ACTGCCGGCC TGCGCCAGAC CAAGGACGAG AAGCACACCC GCCTGTTGAA GACGGCTGAC ACTGCCGCTG GCGTGGTCAC TTACAAGGGC CGCACCGACG TCAAGATGTC CGACACCACC CCGAGCTGGG ATCTGAGCGC GATGTATCAG ATCACCCCGG ACGTGAGCGT CTATGCCAAG GTCGCCCGCG GCTTCCGCGG CCCGACCATC CAGGGCCGTT CGGCGGTGTT CAATGCCGAC TTCACTACCG CCGATTCGGA GACGATCCTG TCCTGGGAAG CAGGCGTGAA GAGCAGCCTG TGGGACAACC GCCTGCGCCT GAACGCCACC GCGTTCACCT ACACCGTCAA CGACATCCAG CTCAACGGCA ACGATTCGGA CGGCAACGGC GTGCTGTTCA ACGCCGACAA GGCCAAGGCC TACGGTTTCG AAGCGGACAT GGAGCTGCGC CCGATCCAGA ACCTGACCCT GAGCGCCGGC CTGAGCCTGC TGCACAGCGA GATCAAGGAC AAGCGCGTCT ACGCGCAGGT CTGCGGCCTG AACGGCCAGG TGGTGTGCAC GGTGAACGAT CCGACCATCA AGGTCGGTGC CAACACCTTC GCGCAGATCG ATGGCAACCC GCTGCCGAAC GCGCCGAAGT ACAACATCAA CCTGGCAGCG CGTTACGACT TCCCGGTCAG CGACGCGGCC ACGATGTTCG TGTCCACCGA CTGGAACAAG CAGGGCTACA CCAGCTTCGT GCTGTACGAC AGCAAGGAGT TCAACTCCAA GGGCGATTTC GAGGGTGGCC TGAAGATCGG CTATTCGGGC AACTACGGTG CCTACGAAGT GGCGCTGTTC GCGCGCAACA TCACCAACGA GAAGAACCTC AAGGGCGTGA TCGAGAACTA CATGGCCGCC GTCTACAACG AACCACGTAC CGTGGGTGTC TCGCTGAACA TGAACTGGTA A
|
Protein sequence | MPSHSDSRRS SGMSSSLVSF RRHPLALACA GLALAASFGA AAQDSAPTPT GLDTITVTAE HREQNLQEVP VSVGVVQGER MRDFTAGGDD TLLALSGRVP SLYAETTTGR IFPRFYIRGL GNIDFYLGAS QPVSIIQDDV VLEHVVLKSN PVYDVDQVEV LRGPQGSLFG RNTTAGIVKF DTLKPTQDYS GRVSASYASY NSVSIDGGFG GPINDIASFR VSALYQHRDD YVDNTYTGPS ADGTVSPKKN AMGGFDDRNV RAQLLLTPGD QFSILASAHA RDYEGTSTLF LRNALTKGSN QTDVPRDQVA YDEADNNPQA YKTYGGLVKA RYDFGAVDFT SITAYETTSG YSRGDTDGGA AVNFPVNGVP NGYGQSMGQI RDLDQWTQEF RLASHDDSAL QWQAGAFYFN GSDTTDFYQR AWFLKGAARN PNNWVRLRNK NTSWAGFGQL SYAFTDKFTV TAGLRQTKDE KHTRLLKTAD TAAGVVTYKG RTDVKMSDTT PSWDLSAMYQ ITPDVSVYAK VARGFRGPTI QGRSAVFNAD FTTADSETIL SWEAGVKSSL WDNRLRLNAT AFTYTVNDIQ LNGNDSDGNG VLFNADKAKA YGFEADMELR PIQNLTLSAG LSLLHSEIKD KRVYAQVCGL NGQVVCTVND PTIKVGANTF AQIDGNPLPN APKYNINLAA RYDFPVSDAA TMFVSTDWNK QGYTSFVLYD SKEFNSKGDF EGGLKIGYSG NYGAYEVALF ARNITNEKNL KGVIENYMAA VYNEPRTVGV SLNMNW
|
| |