Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2685 |
Symbol | |
ID | 6477175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2998450 |
End bp | 3001530 |
Gene Length | 3081 bp |
Protein Length | 1026 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642731871 |
Product | TonB-dependent receptor |
Protein accession | YP_002029068 |
Protein GI | 194366458 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCACA CCACCTTCCG CACGCCGGCA CGCCGGCTGC TGAGCACCGC ACTGGTCAGC TGCCTGATGC TGGCCGCCGC TCCGAACGTC ATGGCGCAGT CGGCCAATGC CAGCCTGCGC GGCCAGGTTT CCGGCGCCCA GGCCGGTTCT GAAGTCACCG CCACCAACGT GGCCACCGGC ACCGTCCGCC GCGGCACTGT GCGTGCCGAT GGCAGCTACT CGCTGATGGG CCTGGATCCC GGCACCTACA ACGTGGTCGC CAATGGCCAG ACCCAGAAGG TCACCGTCAC CGTGGCTTCG ACCGCGACGC TGAACTTTGC CGACGCCGCC AGCAGTACTC CCGGCACGAC CGCAGCCACC AACCTGGACA CCGTCAACGT TGTTGCGCCG ACCCTGCTGC AGGAAGTGCG CACCTCTGAA GTCGGCAAGA CCGTCAGCCT GCAGCAGATC CAGACCACCC CGCAGGTGTC GCGCAACTTC CTGGAGTTCG CCGACGCGGT GCCGGGCATG ATCTTCACCC GCGATGCCAA GGGCAACACC TCGCTGCGCG GCGGCGCCAC CAATTCCGAC GGCACCAACG TCTACATCGA TGGTGTGGGC CAGAAGAGCT ACGTCAAGGG CGGCGGCATC TCCGGCCAGT CCGGAAGCGC AGGCAATCCG TTCCCGCAGC TGGCCATCGG TGAATACAAG GTCATCACCG GCAACTACAA GGCCGAGTAC GGCCAGGTGT CCAGTGCAGC GATCACCGCC GCTACCAAGT CCGGTACCAA CGAGTTCAAG GGTGAAACCT TCTACCGTTA CACCAACGAC AGCATGCGCG CGATGACCCC GGCCGAACGC CAGCCGGGCA AGAGCAAGGA AGAATCGGCC GAGAAGGAAT ATGGCTTCGC GCTGGGTGGC CCGATCATCA AGGACAAGGC CCATTTCTTC GTCACCTATG AAGCCAAGCG CTTCGATCTG CCGGTGACCA TCGCGCCGGA CGGTGCGGTG AGCTCGGCGG CCGCCAATCT GCCCGCCGAT GGTCTCGCAG GTCTCGGCCC GGCCAGCCAG CCGTTCCAGC AGGACCTGAT CTTCGCCAAG ATCGACTTCG AGCCGACCGA TAACGATCGT ATCGAGCTGA CCTTCCAGGA TCGCGACGAA ACCCAGCAGC AGTTCAGTGA CCAGACCGCC AAGGTGCACG GCAAGGTGGT GGACAACACC GACCGCCGCT ATGCCCTGCG CTGGAACCAC AGCGGCGAGC GGTTCTACAA CGAGCTGATG GTCACCCATG AGGAGGCGTT CAACAATCCG CTGCCGCTGA CCTACGGCAA CGGTATCGTC TACACAGCGC CGGACTTTGG TGACAAGAAC CGGAACACCC CGCAGGAAAA GACCCTCGTC CAGATCGGCG CAGCCGATGC GTTCGCCTCT CAGGTGAAGG GCCAGAAGGG CTGGGCGATC GAGGATAACC TGACCCTGGA CGGCCTCCAG TGGGCCGGCG ACCACACCAT CAAGATGGGC GCCAAGTACA AGCAGATCGA TCTGTACGCG TCCGATGCCG CGCAGATCAA TCCGCAGTTC TTCTACACCA TCGACAACCC TGCCTTCTCC TCCGGCACCC CTTACAAGGC GCAGTTCACC AAGGCCAGTA CTGGTGTCAC CGGCGTGCAG TCCGAGGTGC GCGCCAAGGT CAAGCAGATC GGCTTGTTCA TCCAGGACGA CTGGCAGGTC AATGATCACC TGCAGCTGAA CATCGGCCTG CGCTGGGACT ACGAAAAGAA CCCGGTCTAT ACCGATTTCG TGACCCCGCC GGAGGTTGTG AACGCATTGT TCTCGCAGGA CAGGCATGCG CCTGCGGGCC AGACCTATGC GCAGACGCTG GCGCTCAGTG GTTTGAACGT CAACGACTAC ATCAGCACCG GTCACAATCG CAAGAATTTC AAGAATGCCT GGCAGCCGCG CCTGGGCTTC TCGTATGACG TCAACGCCGA TGAGCAGCAC GTGTTCCATG GTGGCGCCGG CCGGTCCTAT GATCGCGACC TGTTCGACAA CCTGGCACTG GAAACCACCA AGCTGGCATT GCCGCAGCCG ACCGTGTTCT TCCGCAACCC GGCCACCGGC AGCTGCATGT ACGGACAGAC CCCGTGCTTT GACTGGAACC CGAACCTGAT GAACGGCATC GAGAACGTGC AGGCACTGCT GGGTTCCACC AGCAATGAAG GCATGGAAGT CGATCTGCTG AACAACAACA TGAAGGTGCC GTACTCCGAC CAGTTCAGCC TCGGCATGAG CAACCAGATC GGCGAGTGGC TGACCGATGC CACGATTTCA CGCACGCTGA CCTACGACGG CTTCGCCTAC ACGCTGGGCA ACCGCTTCAA CAACGGCAAT TTCTTCGACA ACCAGATGCT GTGCGGCGCT GACGAGCCGA CCTACGGTCA GCCGTGGGGC TGCAGCATCC CGGGCTTCGG CAGCCTGATC ATCGGCCAGC AGGGCATCAA GACCCGCTCC ACCCAGATCC TGCTGTCGGC GCAGAAGCCG TACAGCAAGG AAAGCGGCTG GGGCACCTCG ATCGCCTACA CCTGGACCAA TGCCCGCCAC AACCGCAACA TCAACGAGCA CTATTCGTTC GATCGCGGCA CCATCGGTGA ATACCCGACC ATCAAGTCCA ACGGCGCGCC GCGCCACCGC CTGGTGGTCA CCGGCTCGTA TGACGGCTTC TGGGGCATCA CCTTTGGTGG CAAGCTGACC CTGGCCACGC CGACCCCGGG CAACGACTGG TCCTGCATCG CCCAGGCCGG CAATTCGAAC TGCATGCCGA CCCCGGCTGC AGGCACACCG TCGGGCAACG GCCACTTCCT GCTCGGCGGC AAGATCTTCG GCTACCGCTC GCTGGATCTG CAGGCGACCA AGACTTTCAA GCTGGCCGGC GATACCGAGC TGTATGCCCG TATCGACATC ATCAACGTGC TCAACTTCGA CAACTTCTCC AAGCTGAACT ACGTGAAGAG CGACGGCAAG CTGCTGGTCA GCTACAACGA GACCGGCGAC ATCATCGGTA CGCCGCGCCA GGTCAAGGCT GAGGTGGGCT TCCGCTTCTA A
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Protein sequence | MMHTTFRTPA RRLLSTALVS CLMLAAAPNV MAQSANASLR GQVSGAQAGS EVTATNVATG TVRRGTVRAD GSYSLMGLDP GTYNVVANGQ TQKVTVTVAS TATLNFADAA SSTPGTTAAT NLDTVNVVAP TLLQEVRTSE VGKTVSLQQI QTTPQVSRNF LEFADAVPGM IFTRDAKGNT SLRGGATNSD GTNVYIDGVG QKSYVKGGGI SGQSGSAGNP FPQLAIGEYK VITGNYKAEY GQVSSAAITA ATKSGTNEFK GETFYRYTND SMRAMTPAER QPGKSKEESA EKEYGFALGG PIIKDKAHFF VTYEAKRFDL PVTIAPDGAV SSAAANLPAD GLAGLGPASQ PFQQDLIFAK IDFEPTDNDR IELTFQDRDE TQQQFSDQTA KVHGKVVDNT DRRYALRWNH SGERFYNELM VTHEEAFNNP LPLTYGNGIV YTAPDFGDKN RNTPQEKTLV QIGAADAFAS QVKGQKGWAI EDNLTLDGLQ WAGDHTIKMG AKYKQIDLYA SDAAQINPQF FYTIDNPAFS SGTPYKAQFT KASTGVTGVQ SEVRAKVKQI GLFIQDDWQV NDHLQLNIGL RWDYEKNPVY TDFVTPPEVV NALFSQDRHA PAGQTYAQTL ALSGLNVNDY ISTGHNRKNF KNAWQPRLGF SYDVNADEQH VFHGGAGRSY DRDLFDNLAL ETTKLALPQP TVFFRNPATG SCMYGQTPCF DWNPNLMNGI ENVQALLGST SNEGMEVDLL NNNMKVPYSD QFSLGMSNQI GEWLTDATIS RTLTYDGFAY TLGNRFNNGN FFDNQMLCGA DEPTYGQPWG CSIPGFGSLI IGQQGIKTRS TQILLSAQKP YSKESGWGTS IAYTWTNARH NRNINEHYSF DRGTIGEYPT IKSNGAPRHR LVVTGSYDGF WGITFGGKLT LATPTPGNDW SCIAQAGNSN CMPTPAAGTP SGNGHFLLGG KIFGYRSLDL QATKTFKLAG DTELYARIDI INVLNFDNFS KLNYVKSDGK LLVSYNETGD IIGTPRQVKA EVGFRF
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