Gene Smal_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2388 
Symbol 
ID6476871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2685360 
End bp2686286 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID642731569 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_002028774 
Protein GI194366164 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.464978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.514905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG ACGCGATCGC GCGCGAAGCC GCACGCTGGT GGCTGGATGG GCACGACGGT 
GGCCGCGACG AGAACGCGTT CGACCAGTGG TACCAGGCCG ACCCCCGCCA TGCTACGCAG
TACCAGCATC TGCAACACCT GTGGCAGGCC GGTGCGACGC TGCCCAGCCT GCAGAGGCAA
CAGCAGCGCA GGCAACGCCG TCGCCTGCGC GAAGCCGGCA TTGCGGTTCT GTTGCTGTGC
GCGCTGGGTC TCTACAGCCG CCATGTGTCG CCGCCCGTAG CGCAGGTCCT GCGTACGGCC
GCTGGCGAGA TCCGCGAGGA GACCCTTCGG GATGGCTCGC ATATGCTGTT GTCGCCGGGC
AGCGAAGTGC ATGTGCGCGT CGACGCACAG CGCCGCCAGC TGCAGCTGCA GCGAGGGCAA
GCCTGGTTCA AGGTCGCCGC CGATGCCGAC CGGCCATTCC AGGTACACAC CCCACAGGGC
ACCGTCACCG CACTGGGAAC CGCATTTGAT CTGGCCGTGC AGGGCGACAG CAGCGTGGTC
ACGGTCACCG AACACAGCGT CCGCGTGGAA AGCGGCGCCA GCAGCGTGCA GGCCAGCGAG
GGCCAGCAGC TTCGCTTCAA TGGAAACACG CCGGCGATCG CGACAGAGGC AGACAGCAGT
GTCCTGGCCT GGCGCGAACG GCGCCTGCAC TGGGTGTCGG CCCCCCTGGC TGAAGTCACC
AGGGGCCTGG ACCGTTGGCA TGGCGGGCAC ACGTGGGTCG TCGGCGAGCG CCTGCGCCAG
CAGCCGGTCA CCCTGCTCGG CAGTGCCGAC GGTGCGGCCA GCAACCGCGA CCAGCTGGCC
ACGCAGCTGC ATGTGCGCGT GCTGCGTCTC GGCGCGGGCA TGCAGCTGTG GTTGCCGCCA
CGCGGGGAAC AGCACGATGC ACCCTGA
 
Protein sequence
MSQDAIAREA ARWWLDGHDG GRDENAFDQW YQADPRHATQ YQHLQHLWQA GATLPSLQRQ 
QQRRQRRRLR EAGIAVLLLC ALGLYSRHVS PPVAQVLRTA AGEIREETLR DGSHMLLSPG
SEVHVRVDAQ RRQLQLQRGQ AWFKVAADAD RPFQVHTPQG TVTALGTAFD LAVQGDSSVV
TVTEHSVRVE SGASSVQASE GQQLRFNGNT PAIATEADSS VLAWRERRLH WVSAPLAEVT
RGLDRWHGGH TWVVGERLRQ QPVTLLGSAD GAASNRDQLA TQLHVRVLRL GAGMQLWLPP
RGEQHDAP