| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2288 |
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| Symbol | |
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| ID | 6476701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 2566958 |
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| End bp | 2569378 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642731469 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_002028674 |
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| Protein GI | 194366064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.540701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGA TGCAGTTCAC GCCGAAGTTT CCTTCCACGC TTGTCCGTTC GCGGTTGGGT
CTGGCCGTAG CCAGCTCATT GATGCTCGCC GCCATGGGCA CCGCAAATGC TGTCGACGTC
GGCCCCGGCC AGACCGTCAC CATCACCCCA GGAAGTGCTT TCGAGGGACA GAATCTCTCC
GTCCATGGAG GAACCGCCAA TGTTCTCGGC GCCCGCATGG GCGCACTGGA CTCGTTCTCT
GCAGGCGGCA CACAACAGAC AATCATCAAC GCAGATGGTG CTGGCTTCAC GTCAACCACA
GGCAATTTCG TACGGAGCTC AACAGCGGTC TTCCGCAATT CGGTGCTGAG CGCCACAACC
GGCCCGGCCC TTGGTTTGGC ACGATCAGGC GCTGTCGATG GCAATGGACG CCCCTACCCC
AGAGTGTCGT TGATCGACAG CTCACTCACT TCCACACGCA TCGGACTGCA GGTGCTCGCC
GGCGGCTACG CTGATGTAGA CGGTTCGACC ATTTCCGGCG GTACGTATGG GGTCTCTGTC
GGTGCGGGCT CCGTTTCGCT GCGCAATGGC TCGACGGTCA ACGGAGTCAC AGCTGGAATC
CTGATCCTCT CGAGCCCAAC CATCGAAGAG AATCTCGCCG ACTGGGGCGT GATGGTCGAT
GGTTCACACA TCGAAGCAAG CAACGGCAGC GCCATTCTGT TCGGCGCTCA TCTGCCTTCT
GTATCCCGTC CGGATACGCT GTTGATACAG AATGGTGCGA CTCTGGTGGG GAGCAATGGC
GTCATCATCT CCACCCGCGA CAACGCCCAC TTCGACGTCA CCGCCCGCAC CTCCACACTC
AAGGGCGACA TCACCATTGC CGATACCGCC ACCGGCACGC TGCGCTTCCT TGACGGCCTC
GACCTCACCG GCCGCATCCT CGGCCCGGCC GACGTCATCG TCGACCAGGG CGGCCGCTGG
ACACTGTCCG GCGACAGCAA CACCGGCAAC CTCACCCTGG GTGCAGGCAG CAATATCTTC
CTCGGTGCTG CGGGTACGGC GGCCTATCCG CAACTGACCG TCAACGGCAA CTACGCCGGC
AATGGCGGCA CCCTGCACTT CAACACGGTG CTGGCCGGCG ACGACGCAGC AAGCTCGCGC
GTGCATGTCA CCGGCAATAC CAGCGGCACC ACCCAGGTCA CCGTCAACAA CATTGCCGGC
GCTGGTGCAC AGACCGTCAA CGGCATTCCG TTGATGCAGG TGGACGGTGC CAGCAATGGT
CACCTCGCGC TGCAGGGCCG CGCCATCGGC GGCATGTACG AGTATTTCCT GCGCAAGGGC
ACTCCGGGCG CGACCAACGG CAACTGGTAC CTGACCTCGG CCTACACCGG CAATCCGTGC
GACATCAATC CGGCGCTGCC GGAGTGCCAG GGCACTGGTC CGGTGGATCC GGTCGATCCT
GTTGACCCGG TCGATCCGGT CGATCCGGTG GACCCGGTCA ATCCCGTCGA TCCGGTCCCC
GTGCTGCGTC CGGAGCCGGG CGCGTACCTG GCCAACCAGG CCGCGGCCGT GCAGATGTTC
CAGCTGCGCC GCCACGACCG CGGCGAGCCC GGCTTCGACC GCGCCCGCAT CGGCACCTGG
GTGCGCGCCG GGCGTGACCA GCTGCAGGCG AACGTGGCCG GCCAGGTCGA TGCCCGTACC
CACATCAATA CCCTGCAGCT GGGCAGCGAT GTCTGGCGCT GGGGCGATGG CCGTGGCCAG
GTCGGCGTGA TGCTCGGCAC CGGCGAGGCA ACCACGCAGG CGGTGTCGAC GCTGAGCGGT
TATGGCACCC GCGGCAAGGT CAAGGGCAAG TCGGCCGGTG TTTACCTGGG CTGGGTGCAG
GATGCACAGA GCAGTGCCGG CCTGTATGTG GACGGCTGGC TGCAGGCGGC ACGCTTCGAC
AACGAGGTGC AGGGCGAAGG CATCGCCCGC GAGACCTACG ACTCCAGGAC CCGCAGCGCA
TCGCTGGAAG CCGGTTATGC GTGGGCCATT CGCAGCAGTG AGGCCAGCAC GCTGTACCTG
CAGCCGCAGG CGCAGCTGGC CTGGACCGAC TACGACGGTG ACAGCCTGGT CGAAAACAAT
GGCACCACGG TCGAGGATGG TCGCGGCGGC GGCCTCAACA GCCGCCTCGG CGTTCGCCTG
TTTGGCCAGG GCACGCTGCA GGGCAACCGC GTGCAGCCGT TCCTGGCGGC GAACTGGCTG
CGTGGCGAGC GCGATGAGGC CATGCGCTTC AACAGTGAGT CGTTGAGCGC GAAGACGCCG
GAGAACCGCT ACGAAGTGCA GGCCGGTGCC CAGCTTCAGC TGGGCCAGCG CTGGAGCGCA
TGGGGTGACC TGCGTGTACA GCGTGGCGAC AGCGGCTATC GCAACCACGG TGCCCAGGTG
GGCCTGCGCG CCGCCTGGTA A
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| Protein sequence | MRMMQFTPKF PSTLVRSRLG LAVASSLMLA AMGTANAVDV GPGQTVTITP GSAFEGQNLS
VHGGTANVLG ARMGALDSFS AGGTQQTIIN ADGAGFTSTT GNFVRSSTAV FRNSVLSATT
GPALGLARSG AVDGNGRPYP RVSLIDSSLT STRIGLQVLA GGYADVDGST ISGGTYGVSV
GAGSVSLRNG STVNGVTAGI LILSSPTIEE NLADWGVMVD GSHIEASNGS AILFGAHLPS
VSRPDTLLIQ NGATLVGSNG VIISTRDNAH FDVTARTSTL KGDITIADTA TGTLRFLDGL
DLTGRILGPA DVIVDQGGRW TLSGDSNTGN LTLGAGSNIF LGAAGTAAYP QLTVNGNYAG
NGGTLHFNTV LAGDDAASSR VHVTGNTSGT TQVTVNNIAG AGAQTVNGIP LMQVDGASNG
HLALQGRAIG GMYEYFLRKG TPGATNGNWY LTSAYTGNPC DINPALPECQ GTGPVDPVDP
VDPVDPVDPV DPVNPVDPVP VLRPEPGAYL ANQAAAVQMF QLRRHDRGEP GFDRARIGTW
VRAGRDQLQA NVAGQVDART HINTLQLGSD VWRWGDGRGQ VGVMLGTGEA TTQAVSTLSG
YGTRGKVKGK SAGVYLGWVQ DAQSSAGLYV DGWLQAARFD NEVQGEGIAR ETYDSRTRSA
SLEAGYAWAI RSSEASTLYL QPQAQLAWTD YDGDSLVENN GTTVEDGRGG GLNSRLGVRL
FGQGTLQGNR VQPFLAANWL RGERDEAMRF NSESLSAKTP ENRYEVQAGA QLQLGQRWSA
WGDLRVQRGD SGYRNHGAQV GLRAAW
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