| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2174 |
|---|
| Symbol | |
|---|
| ID | 6476505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2437492 |
|---|
| End bp | 2439846 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642731356 |
|---|
| Product | alpha-1,2-mannosidase |
|---|
| Protein accession | YP_002028561 |
|---|
| Protein GI | 194365951 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
|---|
| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.215171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGC CCACGCTGGA CCGTCGTCTC CTGATCGCCG TCGCCGCCAC GGCGATGCTC
GCCTCCGGCC TGGCGTCGGC CGCTCCCGCC AAAACCGCCG CCGACAAGGC CTACGCCTCG
GTCGACCCGT TCATTGGTAC TGGAGGTGAA GGCCACACCT ACCCCGGTGC CACGGTGCCG
TTCGGCATGG TCCAGCTCAG CCCGGACACA CGCATCCAGC CGCGCGAGAA GGCCTATGGC
TGGGCGGCCG GCTACCGTTA CGACGACAGC AGCATCGTCG GCTTCTCGCA TACGCATTTT
TCCGGCACCG GTCATTCGGA CCTCGGCGAC ATCCTGCTGA TGCCGTTCAC CGGCACTCCC
GGCCTGGAGC GCGGTGATCC GGAAAAGCCG CGCAGCGGCT ATGCATCGCG CTTCCGGCAC
GCTGACGAGA AGGCCGAGCC GGGCTACTAC GCGGTCACCC TGGATGACTA CAAGGTGCGC
GCCGAACTGA CCACCAGTGC GCGCGTGGGC GTGCACCGCT ATACGTTCCC CAAGGGCACC
GACGCCAAGG TGCTGCTGGA CATGCGCACC AGCATGTACG ACTACCCGGG CAAGGTGCTG
TGGTCGCGGG TACGGGTGCG CGCCGACGGC ACGGTGACCG GCTTCCGCGA AACCCGTGGC
TGGGCGCCGG GCCGCCAGCT GTATTTCGCG ATGCGTTTCT CGCGGCCGCT TTCCGGGCAT
GAGCTGCACA ACACCGAGCA GGACATTGTC TACAAGGGCT TCCCGCCGCC GGGCGAGAAG
GATCCGGCGC AGCGTGCGCA GATCGAAGGG CGCCAGTTGG TCGGCACCTT CGCCTTCGGC
AAGCTGGACG CACCGCTGGT GGTCAAGGTC GCGATCTCGC CGGTCAGCGA AGCCGGTGCC
ATTGCCAACC TCGACGCGGA AGTGGCCGGC TTCGATTTCG ACCGCGTTCG CGCGCAGGCC
AAGCAGGAAT GGACGCAGGC GCTGTCGGTG CTGGATATCG ACGCCCCCGA GCACGCCCGG
CGCAGTGCCT ATACCGCGCT GTACCACACC CTGCTGGGGC CGACGCTGTT CATGGATGCC
GATGGCCAGT ACCGCGGCTC GGACAACGCC GTGCACCAGG CCAAGGGTTA TACCAACTAC
TCCACGTTCT CGCTGTGGGA TACCTATCGC GCGCTGCATC CGTTGCTGAC CCTGGTGCAG
CCGGAGAAGC GCAACAGCGA CTTCGTCAAT TCCATGCTGG CCCACCATGA GCACAGCCCC
TACGGCATGC TGCCGGTGTG GTCATTCCAT GGCCTGGAAG ACTGGTGCAT GATCGGCTAC
CACGCCGTGC CGGTGATCGC CGACGCCTAC GTGAAAGGTA TCCGCGGCTT CGACGCCGAC
AAGGCGCTGA AGGCAATGGT CGAGACCGCC AACTACGGCC CGTACGATGG CATCGCGCAG
TATCGCGAGC TGGGCTACGT GCCGATCGAC GAGGAAGGTG AGGCGGCCAG CAAGACGCTG
GAATATGCCT TCGATGACTG GACCATTGCT CGCATGGCAC AGGCGATGGG CAAGACCGAT
GTTGCGGCCA CCTTCGACAA GCGCGCCGGC AACTGGCGCA ACGCCTTCGA CAAAGACACC
GGCTTCATGC GCGCACGCAA GCGCGATGGC AGCTTCCGCA CGCCATTCGA CCCCAGCGCC
AGTGGATACG GCACCGACTA CACCGAGGGC AATGCCTGGC AGTACTCCTG GTACGTGCCG
CAGGATGTGG CCGGTCTGGC GGCAGCGCAC GGTGGCAGTG ACAAGCTGCT CGCGCGCCTG
GACGAGGTGT TCAACGCCAA GGTCGATCCG TCCATCTTCG AGCACATGGA AGACATCACC
GGGCTGATCG GCTGGTATGC ACATGGCAAC GAACCCAGCC ACCATGTGGC CTACCTGTAC
TCGTACGCCG GCCAGCCGTG GCGCACCCAG GCGCGCCTGA AGCAGATCAT GGACACCCAG
TACGCCGACC GCCCCGATGG CCTGGCCGGC AATGATGACG TCGGCCAGAT GTCGGCCTGG
TACGTGTTCA CCGCCTTGGG CTTCTATCCG GTGGCCCCGG GCTCGGGCGA GTACATCCTG
GGTCGCCCGT TCCTGCCGAA GACCGCAATG CGCCTGCCGA ACGGCAAGAC GTTCACCATC
GTGGCCGATG GGCTGGATGA CAAGCACACC TATGTGGGCA ATGTGAGCCT CAACGGCAAG
CCATTGCAGC GCACCTTCCT GCGCCACGAC GAGATCCTGG CAGGTGGCGA ACTGCGCTTC
AGCATGCAGG CCGAGCCGAA CAGGGACTGG CCGGGGCAGG GCGCGCAGGC GCCGTACTCG
ATGAGCACGC TGTAA
|
|---|
| Protein sequence | MPMPTLDRRL LIAVAATAML ASGLASAAPA KTAADKAYAS VDPFIGTGGE GHTYPGATVP
FGMVQLSPDT RIQPREKAYG WAAGYRYDDS SIVGFSHTHF SGTGHSDLGD ILLMPFTGTP
GLERGDPEKP RSGYASRFRH ADEKAEPGYY AVTLDDYKVR AELTTSARVG VHRYTFPKGT
DAKVLLDMRT SMYDYPGKVL WSRVRVRADG TVTGFRETRG WAPGRQLYFA MRFSRPLSGH
ELHNTEQDIV YKGFPPPGEK DPAQRAQIEG RQLVGTFAFG KLDAPLVVKV AISPVSEAGA
IANLDAEVAG FDFDRVRAQA KQEWTQALSV LDIDAPEHAR RSAYTALYHT LLGPTLFMDA
DGQYRGSDNA VHQAKGYTNY STFSLWDTYR ALHPLLTLVQ PEKRNSDFVN SMLAHHEHSP
YGMLPVWSFH GLEDWCMIGY HAVPVIADAY VKGIRGFDAD KALKAMVETA NYGPYDGIAQ
YRELGYVPID EEGEAASKTL EYAFDDWTIA RMAQAMGKTD VAATFDKRAG NWRNAFDKDT
GFMRARKRDG SFRTPFDPSA SGYGTDYTEG NAWQYSWYVP QDVAGLAAAH GGSDKLLARL
DEVFNAKVDP SIFEHMEDIT GLIGWYAHGN EPSHHVAYLY SYAGQPWRTQ ARLKQIMDTQ
YADRPDGLAG NDDVGQMSAW YVFTALGFYP VAPGSGEYIL GRPFLPKTAM RLPNGKTFTI
VADGLDDKHT YVGNVSLNGK PLQRTFLRHD EILAGGELRF SMQAEPNRDW PGQGAQAPYS
MSTL
|
|---|
| |