Gene Smal_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1709 
Symbol 
ID6475579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand+ 
Start bp1922519 
End bp1923130 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content66% 
IMG OID642730890 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002028096 
Protein GI194365486 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.922562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTG CCCCGCAACG CCTGACCGAC CGCAAACGCG ACGCCATCGT GCGCGCGGCG 
GTGGAGGAGT TCCGTGCGGC GGGGTACGAG GCGACCAGCA TGGACCGCAT CGCCGAAGTG 
GCCGGGGTCT CCAAGCGCAC CGTCTACAAC CACTTCCCGA GCAAGGAAGC GTTGTTCTCG 
ATGATCCTGG AGGAGCTGTG GGAGCGCAGC GTGGCCAGCG ACGCACTGCC GTACCGCGCC 
GACCAGCCGC TGCAGGCGCA GCTGATGCAG CTGCTGGGGC AGAAGCTGGA ACTGCTCAGC 
GATGCCAACT TCATCGACCT GGCACGGGTG GCAATGGCCG AGATCATCCA TTCGCCGGAA 
CGTGCGCAGG CCATCGTCTG CCGCATGGGC GAGAAGGAAA GTGGCGAGAG TGCCTGGATC 
CGCGCGGCGA TCGCCGACGG CCGGCTGCGC AAGGTGGATC CGGAGTTCGC CGGTCACCAG 
CTGCACGGCC TGGTGAAGAG CTTTGCGTTC TGGCCGCAGG TGACGATGGG TCAGGCGCCG 
TTGAACGAAC AGGAGCGTGC ACGCGTGGCC GAATCGGCGG TAGCGATGTT CCTGGGTTTC 
TACGCGATCT AG
 
Protein sequence
MPRAPQRLTD RKRDAIVRAA VEEFRAAGYE ATSMDRIAEV AGVSKRTVYN HFPSKEALFS 
MILEELWERS VASDALPYRA DQPLQAQLMQ LLGQKLELLS DANFIDLARV AMAEIIHSPE 
RAQAIVCRMG EKESGESAWI RAAIADGRLR KVDPEFAGHQ LHGLVKSFAF WPQVTMGQAP 
LNEQERARVA ESAVAMFLGF YAI