Gene Smal_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1299 
Symbol 
ID6475154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1482923 
End bp1483651 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID642730467 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002027687 
Protein GI194365077 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0317425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.569469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTG AAAACCCGAT GCATCGACTG CTGATCGTCG ACGACGACAA CGACATCCGC 
ACCCTGCTGG CCGAGCAGCT CGGCCGTGCC GGCTACCAGG TGAGCACGGC CGCCGATGGC
ACCGCCATGC GCCAGCTGCT GGACCGTGAG CATGTGGATC TGATCGTGCT CGACCTCAAC
CTGCCCCGCG AGGATGGCCT GACCCTGTGC CGCGACCTGC GCGCGCGCTC GAACACGCCG
GTGATCATGC TGACCGCGCG TGCCGAGCCG ATCGATCGCG TGCTGGGCCT GGAAATGGGC
GCGGACGACT ACCTGGCCAA GCCGTTCGAA CCGCGCGAGC TGCTGGCGCG CATCCGCAAC
GTACTGCGCC GGACCGAGGC GCTGCCGGCC AACCTGGAGC CGCTGGCGGT GCGCCGCGCG
CGCTTCTCGC GCTGGGTGTT CGACCTGGAG CATCGCCACC TGGTGGACCC GGATGACCGC
GTGGTGGTGT TGTCCGGTGC CGAATTCCGC CTGCTGCGGG TGTTCATCGC ACACGCCAAC
AAGGTGCTGT CGCGCGAGCA GCTGGTCGCG CTCAGCAGTG GCCGCAACTA CGAGGCGCAG
GACCGTGCGA TCGACCTGCA GGTAAGCCGC TTGCGCAACA AGCTCGGTGA TGACGGCGGC
CCGGATGGGC TGATCAAGAC CGTGCGCAAC GAAGGCTACG TGCTTGCCTC GGCCGTCAAT
CTGGAATAA
 
Protein sequence
METENPMHRL LIVDDDNDIR TLLAEQLGRA GYQVSTAADG TAMRQLLDRE HVDLIVLDLN 
LPREDGLTLC RDLRARSNTP VIMLTARAEP IDRVLGLEMG ADDYLAKPFE PRELLARIRN
VLRRTEALPA NLEPLAVRRA RFSRWVFDLE HRHLVDPDDR VVVLSGAEFR LLRVFIAHAN
KVLSREQLVA LSSGRNYEAQ DRAIDLQVSR LRNKLGDDGG PDGLIKTVRN EGYVLASAVN
LE