| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1258 |
|---|
| Symbol | |
|---|
| ID | 6475110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1432468 |
|---|
| End bp | 1433826 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642730423 |
|---|
| Product | membrane-associated zinc metalloprotease |
|---|
| Protein accession | YP_002027646 |
|---|
| Protein GI | 194365036 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.518188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT TCATCGGATC GGTCTGGTGG ATGATTGTCA GCCTCGGGCT GCTGGTCACC
TTCCACGAAT TCGGGCATTA CTGGATCGGC CGCCTGTGCG GGGTCAAGGT GCTGCGCTTC
TCGGTCGGCT TCGGGCGCCC GCTGTGGTCG CGTCGCGACA AGCACGGCAC CGAGTTCGCC
ATTGCCGCCA TCCCGCTGGG TGGCTACGTG AAGTTCCTCG ACGAACGCGA GGTGGAGGTC
CATCCGCACG AACGCGGCCA GGCTTTCAAC CACAAGACGG TCTGGCAGCG CATCGCCATT
GTCGCCGCCG GACCGATCGC CAACCTGCTG CTGTGCATCC TGCTGCTGTG GGCGATGTTC
GTGATCGGCA AGCAGGACTA CTCGCCGACC ATCGGCCGCG TCAGCGGCAT CGCTGCCACA
GCAGGCCTCG GCAGTGGTGA CCGTGTGCTG CGCGTGGACG AGCGCCAGGT GGTGACCCTG
GGCGAGGCCA GCATGGCGCT GACCGCTGCG GCAATGGACC GCCGTGACGT GAAGCTGGAA
GTGCTGGACC CGGCCGACCA GGTGCGCGTG CGCACCCTTC CGCTGTCGCA GCTGCCAGCC
GGTTTCGATG AACGACGGGT GCCGATCCTG GCGGGCCTGT ACTGGCAGTC GTGGCTGCAG
CCGGCGCTGG TGGAGTCGCT GACCCCGGAT TCGGTCGTCA GCGGACAACT GCAACCGGGC
GACCTGATCG TGGCCATCGA CGGCCAGCGC ATCGACGGCG CCGACCAGGT GATCGGTGAG
ATCCAGGCGC TGGGGCGTGC TGGCGGCCCG GGCATGATCG AGGTCCTGCG TGGCGGCGAG
CGCCTGGCGC TGGAAGTCAC GCCACGCAAG GGCCAGGACG CCAAGGGCGA CCCCACCTGG
CAGATCGGCG TTCAGTTCCC GACCAAATTC AGCCCGCCCT ACGACACCCT GCTGCGCTAC
GGCCCGTTGG ACTCGGTCAC CGTCGCGGTA CGTGAAACCG GCCGCCTGGC GGCCGATTCG
CTCGGCATGA TGGGCCGCAT CGTCACCGGC AAAGCCTCGC TGCAGAACGT TTCCGGGCCG
GTCACCATCG CCCGCGTAGC CAATGTCTCG GCCAAGCGAG GCCTCGACTG GTTCCTGCAG
TTCCTTGCCC TGCTGTCGCT CAGCCTGTGC ATCATCAACC TGCTGCCGAT CCCGATCTTG
GACGGCGGCC ACCTGCTGTA TTACCTTATC GAGTTGGTCA AGGGCAGCCC GCTGAGCGAG
CGTGCCATCG CCGCCGGCCA ATACATCGGC CTGGCGTTGC TGGCCGGGCT GATGGGGTTG
GCGTTCTACA ACGACATCCT CGGCCTGGTC CCGCGATGA
|
|---|
| Protein sequence | MTDFIGSVWW MIVSLGLLVT FHEFGHYWIG RLCGVKVLRF SVGFGRPLWS RRDKHGTEFA
IAAIPLGGYV KFLDEREVEV HPHERGQAFN HKTVWQRIAI VAAGPIANLL LCILLLWAMF
VIGKQDYSPT IGRVSGIAAT AGLGSGDRVL RVDERQVVTL GEASMALTAA AMDRRDVKLE
VLDPADQVRV RTLPLSQLPA GFDERRVPIL AGLYWQSWLQ PALVESLTPD SVVSGQLQPG
DLIVAIDGQR IDGADQVIGE IQALGRAGGP GMIEVLRGGE RLALEVTPRK GQDAKGDPTW
QIGVQFPTKF SPPYDTLLRY GPLDSVTVAV RETGRLAADS LGMMGRIVTG KASLQNVSGP
VTIARVANVS AKRGLDWFLQ FLALLSLSLC IINLLPIPIL DGGHLLYYLI ELVKGSPLSE
RAIAAGQYIG LALLAGLMGL AFYNDILGLV PR
|
|---|
| |