Gene Smal_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1092 
Symbol 
ID6474943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1249243 
End bp1250487 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content66% 
IMG OID642730256 
Productprotein of unknown function DUF819 
Protein accessionYP_002027480 
Protein GI194364870 
COG category[S] Function unknown 
COG ID[COG5505] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGA CCGCCCTGAT CCAGAACGAC ATCGTCGTCT TCGGTTTGAT CGCCGCCACC 
CTCGGCGCCG TGTTCTGGAC CGCCTCGCGC GAGCAGGGGC TGTGGAAGCG CTTCTACACC
TTCGTGCCGG CACTGCTGCT GTGCTACCTC ATCCCCGGCA TCTACAACAC CGTTGGCCTG
ATCGACGGCC AGAACACCAA GCTCTACAAC CCGATCGCGC GTGACATCCT GTTGCCGGCG
GCGCTGATCC TGCTGACCCT GGCGGTGGAT ATCAAGGGCA TCCTGCGGCT GGGTCCGAAG
CTGGTGTTGA TGTACCTGGG CGCCTCGGCC AGCATCATGC TGGGCGCGGT GGTGGCCTTC
CTGCTGATGC GCGCCGTGCA TCCGGAAACC GTGGCCGGCG ATACCTGGGC CGGCATGGCC
GCGCTGGCCG GCAGCTGGAT CGGCGGCGGT GCCAACATGC TGGCGATGCG CGAAGTGTTC
GACGTCAACG CCACCACCTT CGGCCAGTTC GCGGTGGTCG ATGTTGGCGT GGGCTATGTG
TGGATGGCCG CGCTTATCTT CCTGGCCGGG CGCGCGGCGA AGATCGACGC GCGCAGTGGT
GCCGATACCT CGGCGATCGA TGAGCTGAAG GAGCGCATCG CGCGCTTCCA GGCCGAACAC
GAGCGCATTC CCAGCCTGAC CGACCTGATG CTGATCGTGG CGGTGGCCTT CGGCGGCGTC
GGCCTCTCGC ATGCGATCGG CGCGCCGTTG GCGGCATGGT TCAAGCTCAA CGTCAGCTGG
GCCTCGCAGT TCAGCCTGGA CGCACCGTTT GTCTGGGTGG TGGTGCTGTC GACCACGCTG
GGCCTGAGCC TGAGCTTCAC CCGCGCACGC ACGCTGGAAG GCGCGGGTGC CTCGCGGCTG
GGCTCGCTGC TGCTGTACTT CCTGATCGCC TGCATCGGCA TGCAGATGGA TCTGCTGGCG
CTGCTGGACC GCCCGTGGCT GTTCCTGCTT GGCATCATCT GGATCAGCGT GCATATCGCG
CTGCTGTGGT GCCTGGGCAA GCTGTTGAAA GTGCCGTTCT TCTATTTCGC GATCGGTTCG
CAGTCGAACA TCGGCGGACC CGCGTCGGCA CCGGTGGTGG CGGCCGCGTT CCATCCGGCG
CTGGCACCGG TGGGTGTGCT GCTGGGCACG ATGGGCTACG CCACCGGCAC CTACCTGGCC
TACATCGTCG GCATCACCCT GCGCGCGCTG GCGGGGCAGG GCTGA
 
Protein sequence
MPSTALIQND IVVFGLIAAT LGAVFWTASR EQGLWKRFYT FVPALLLCYL IPGIYNTVGL 
IDGQNTKLYN PIARDILLPA ALILLTLAVD IKGILRLGPK LVLMYLGASA SIMLGAVVAF
LLMRAVHPET VAGDTWAGMA ALAGSWIGGG ANMLAMREVF DVNATTFGQF AVVDVGVGYV
WMAALIFLAG RAAKIDARSG ADTSAIDELK ERIARFQAEH ERIPSLTDLM LIVAVAFGGV
GLSHAIGAPL AAWFKLNVSW ASQFSLDAPF VWVVVLSTTL GLSLSFTRAR TLEGAGASRL
GSLLLYFLIA CIGMQMDLLA LLDRPWLFLL GIIWISVHIA LLWCLGKLLK VPFFYFAIGS
QSNIGGPASA PVVAAAFHPA LAPVGVLLGT MGYATGTYLA YIVGITLRAL AGQG