Gene Smal_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1029 
Symbol 
ID6478456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1175761 
End bp1176663 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID642730193 
ProductABC transporter related 
Protein accessionYP_002027417 
Protein GI194364807 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.967418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA TCGATTCACT GTCCAAGACG TACGCCAACG GCGTGCACGC GCTCAACAAT 
GTCAGCCTGG ACATCCCGCG CGGCATGTTC GGCCTGCTCG GCCCGAACGG CGCTGGCAAG
TCGTCGCTGA TGCGCACGCT GTCCACCCTG CAGGAGGCCG ACAGCGGTTC GGCGATCCTC
ACCATTCCCG GCGAAGCACC GATCGACGTG CTGCGCGACA AGGACGCGGT GCGCCGCCGG
CTGGGCTACC TGCCGCAGGA TTTCGGCGTG TACCCGAAGG TCAGCGCACT GGACCTGCTG
GAGCATTTCG CGGTGCTCAA GGGCCTGACC CAGCGCGCGC AGCGCCGCGA GGTGGTCGAT
GGCCTGCTGC AGCAGGTGAA CCTGTGGGAC GCACGCAAGC GCAAGCTCGG CACGTACTCG
GGCGGCATGC GCCAGCGCTT CGGCATTGCC CAGGCACTGC TCGGTGACCC GCGGCTGGTG
ATCGTCGACG AGCCCACCGC CGGCCTCGAC CCCGAGGAAC GCAACCGCTT CCTCAACCTG
CTGGCGGCCA TCGGCGAGAA CGTGGCGGTG ATCCTGTCCA CCCACATCGT CGAAGACGTG
ACCGACCTGT GCCCCACCAT GGCGATCATG AACAAGGGCC AGGTACTGCT GACCGGCCGC
CCCGCCGAAG CCATCGATGC CCTGCAGCAG CAGGTCTGGC GCAAGCAGGT CGACCCTTCG
GAACTGGCCG ACCACGAGGC GCGCTACGTG GTGCTGTCGA CCCGTCTGGT CGGAGGCCGC
CCGGTGATCC ACGTGCACAG TGCCAACGAT CCCGGCGACG GCTTCGCGGC GGTGGCTCCC
GACCTCGAGG ACGTCTACTT CCAGCGCCTG CGCCTGCAGG CCCGTGCCCG CGCGGCAGCC
TGA
 
Protein sequence
MLKIDSLSKT YANGVHALNN VSLDIPRGMF GLLGPNGAGK SSLMRTLSTL QEADSGSAIL 
TIPGEAPIDV LRDKDAVRRR LGYLPQDFGV YPKVSALDLL EHFAVLKGLT QRAQRREVVD
GLLQQVNLWD ARKRKLGTYS GGMRQRFGIA QALLGDPRLV IVDEPTAGLD PEERNRFLNL
LAAIGENVAV ILSTHIVEDV TDLCPTMAIM NKGQVLLTGR PAEAIDALQQ QVWRKQVDPS
ELADHEARYV VLSTRLVGGR PVIHVHSAND PGDGFAAVAP DLEDVYFQRL RLQARARAAA