Gene Smal_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0884 
Symbol 
ID6478157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1029130 
End bp1031601 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content65% 
IMG OID642730048 
Productphage tail tape measure protein, TP901 family 
Protein accessionYP_002027272 
Protein GI194364662 
COG category[S] Function unknown 
COG ID[COG5283] Phage-related tail protein 
TIGRFAM ID[TIGR01760] phage tail tape measure protein, TP901 family, core region 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0603938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA ACGTTCAAAC GACAACGATC ACGATCGGCG GCTCGGTGTC CAAATCGCTG 
AAGGACGCAT TGTCCTTCGC CAACGATGGC ATCAAGCGCA TCGGCACCGA GTTGACACTG
CTGGACCGCA GGCTTGCCCG TCTGAGCACG ACGAGCAAGG AATACGCTCG CATGCGTACA
CAGGTCGACG CGCTGCGTGC CTCGCAGGAG GCACTGGAGA GCATCGAGGC AAAGCGTACC
GCCAATCTGG AGAAGCGCGA GAAGCTCGGC TCGGCATTCG GCGAGGCACG TGGTGCGCTT
GGCACGGCCG TTACCGCGCT GGCCAAGCCG GTAGAGAACG CCTCCGGCTT CGCTCGCCAG
AACCAGCAGA TCGGCGTGGC GGCCAACCTC AGCCGGGCCC AGGTGAGCGC ACTGGGGCAG
GCCATCCTGG AACAGTCGCG TGCAACCAAC CAAGGCGCCG ACACGCTGCA GCGCTCGATC
AGGCTGATGA TCGACGCCGG CATGGATGCG CAATCAGCCC AGGCCAGCCT GGGCGCGATC
GGGCGGACCA CCACCGTCAC CGGCGCCAGC ATCGATGATG TGGCCCAGGC CGCGGCCGCC
CTGCAGCAGT CGTTCAATAT CGATCCCTCG CGCATGCAGA GCGCGCTGGA TGTGCTGGTC
GTCAACAGCC GGCAGGGCGG CCTGGGCCTG AAGGACATGG CCGAAGTGCT GCCCACCCTG
GGTTCGTCGT TCGAAGCGAT GAAGCTGCAG GGCACCTCGG CGGCCGCCAC CCTCGGCGCC
GCCCTGCAGG CCACGCTGGA TTCGGCCGGC GGCGCCGACA AGGCCGCCAG CAACATGAAG
AACTTCATGT CGTCCGTCCT GTCGCCGGAG CTGCAGAACA AGGCGAAGAA GAGCCTCAAC
CTGGATCTGC GCAAGATCAT CGGTGACGCA CAGACCGACG GTGGCAATCC CTTCGATGCG
GCCATGCAGG GAATCATCCA GGCCACCGCA GGCGACCAGA AGAAGATCGG CACCCTGTTC
AGCGATGCAC AGGCGAAGAA CTTCGTCCAG CCGATGATCG AGAACTGGGA TACCTACATC
CGCGTCCGCG ACAAGGCCTT GAATGGATCG GCGGGTACCA CCGATGCGGC GTATGCCGAT
GCGATGCAGA CCGATCCGCA GAAAATCGAA GGCGCCAAGA TCGCTGTGGA CAACCTGTCC
AAGGCCTTCG GTGCGGCGCT GCTGCCGGCG GTGGGCGAGG CTGCGGTCAA ACTGACCGAA
CTGTTGAACG GGGTCACCTC GTTCGTGCAG GAAAACCCGA AGCTGATCGC CAACGCCACG
CAGATCGTGG TCGGCATGCT GGGCATGCGC ACGGCGGTGC TCGGCGCACG CTACGCCTGG
ACGTTCCTGC AGGGCCCGAT CCTGGGCGTA CAGAAGGCCT TCCAGCTGTT CCGGGGTGGC
AGCCTGCTGG CACAGATGGG GCGCTTCGGG CCGATGGCCA TGCGCCTGGC GTCGGGCTTC
CGTGTGGTTG CCACTGCGGT GGCGGCCATC GGTGGCGGGC CGATCACGAT CGCCATCGCA
GCGATCACCG CAGGCGCCAT CCTGGTGCGC AAGTACTGGG AGCCGATCAA GGCATTCCTG
GGCGGCGTCT GGGACGGCCT GAGCGGTGCA GGCACCGCGG CGATGGGTGA ACTGATGCGC
GCGGTTGAAC CACTGCGCCC CGCCTGGGAA GTCATGAGCG GGCTGATCGG CCAGGCGTGG
GACTGGCTGT CGAAGATGCT TGCACCTGCA CAGTACACCG GCAACGAACT GTCACGCGTT
GCCCAGATCG GCAGCTTCCT CGGTACCGTT CTGATGGAAG GCCTGAGAAT GAACATCCAG
CTCATCAGCG GCTTGGTGCA GTACGTCGTC TGGATGGGCA ACGTGTACAC GACCGTCGCG
AGCGGGATCG GCAGCGTAAT GAGCATGATG TGGACCGCGA TCAAGTCCGG TGCCGAATCC
CTGTTCAACT GGCTCGTTCC GAAGCTGGAT TTCCTCATGC CCTACGTCGA GAAGCTGATG
GGGTTCGTCG AAGGAGGCAT TGGCAAGGTC AGTGCGCTGG TCGGCAAGGG CCTGGACTTC
GGGAAGGAGG TGCTTGCCGG TGGTGCGGAA GCGATCGGCA ACGGCATGGT GGGTTACACC
AACATGCGGG CGGGCGGCCG AGGTGGCCTG GATGACGCCG TGGGCCTGGT CGGCGACGTC
GCCACGTTGG ACGCGCCGGG GGCGCGCAAG CGATGGGGAG GCATCAGCGA GGCCGCTCGG
GGTCGTACCG CACCCGACAT GCCATCGCCC TCCCCGCGCG GTGTCACCAC CGTGCAGCAA
CAACAGACCA ACAACATCAC CATCCACCAG CAACCCGGTG AATCCAGCGA ATCGGTGGCA
CGTCGCACGG CCGACGAACT GCAGCGCCGC AACGCGGTTG CTGCCCGTGG CGGCCTGGCA
GACAGGAACT AA
 
Protein sequence
MANNVQTTTI TIGGSVSKSL KDALSFANDG IKRIGTELTL LDRRLARLST TSKEYARMRT 
QVDALRASQE ALESIEAKRT ANLEKREKLG SAFGEARGAL GTAVTALAKP VENASGFARQ
NQQIGVAANL SRAQVSALGQ AILEQSRATN QGADTLQRSI RLMIDAGMDA QSAQASLGAI
GRTTTVTGAS IDDVAQAAAA LQQSFNIDPS RMQSALDVLV VNSRQGGLGL KDMAEVLPTL
GSSFEAMKLQ GTSAAATLGA ALQATLDSAG GADKAASNMK NFMSSVLSPE LQNKAKKSLN
LDLRKIIGDA QTDGGNPFDA AMQGIIQATA GDQKKIGTLF SDAQAKNFVQ PMIENWDTYI
RVRDKALNGS AGTTDAAYAD AMQTDPQKIE GAKIAVDNLS KAFGAALLPA VGEAAVKLTE
LLNGVTSFVQ ENPKLIANAT QIVVGMLGMR TAVLGARYAW TFLQGPILGV QKAFQLFRGG
SLLAQMGRFG PMAMRLASGF RVVATAVAAI GGGPITIAIA AITAGAILVR KYWEPIKAFL
GGVWDGLSGA GTAAMGELMR AVEPLRPAWE VMSGLIGQAW DWLSKMLAPA QYTGNELSRV
AQIGSFLGTV LMEGLRMNIQ LISGLVQYVV WMGNVYTTVA SGIGSVMSMM WTAIKSGAES
LFNWLVPKLD FLMPYVEKLM GFVEGGIGKV SALVGKGLDF GKEVLAGGAE AIGNGMVGYT
NMRAGGRGGL DDAVGLVGDV ATLDAPGARK RWGGISEAAR GRTAPDMPSP SPRGVTTVQQ
QQTNNITIHQ QPGESSESVA RRTADELQRR NAVAARGGLA DRN