Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0884 |
Symbol | |
ID | 6478157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1029130 |
End bp | 1031601 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642730048 |
Product | phage tail tape measure protein, TP901 family |
Protein accession | YP_002027272 |
Protein GI | 194364662 |
COG category | [S] Function unknown |
COG ID | [COG5283] Phage-related tail protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0603938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATA ACGTTCAAAC GACAACGATC ACGATCGGCG GCTCGGTGTC CAAATCGCTG AAGGACGCAT TGTCCTTCGC CAACGATGGC ATCAAGCGCA TCGGCACCGA GTTGACACTG CTGGACCGCA GGCTTGCCCG TCTGAGCACG ACGAGCAAGG AATACGCTCG CATGCGTACA CAGGTCGACG CGCTGCGTGC CTCGCAGGAG GCACTGGAGA GCATCGAGGC AAAGCGTACC GCCAATCTGG AGAAGCGCGA GAAGCTCGGC TCGGCATTCG GCGAGGCACG TGGTGCGCTT GGCACGGCCG TTACCGCGCT GGCCAAGCCG GTAGAGAACG CCTCCGGCTT CGCTCGCCAG AACCAGCAGA TCGGCGTGGC GGCCAACCTC AGCCGGGCCC AGGTGAGCGC ACTGGGGCAG GCCATCCTGG AACAGTCGCG TGCAACCAAC CAAGGCGCCG ACACGCTGCA GCGCTCGATC AGGCTGATGA TCGACGCCGG CATGGATGCG CAATCAGCCC AGGCCAGCCT GGGCGCGATC GGGCGGACCA CCACCGTCAC CGGCGCCAGC ATCGATGATG TGGCCCAGGC CGCGGCCGCC CTGCAGCAGT CGTTCAATAT CGATCCCTCG CGCATGCAGA GCGCGCTGGA TGTGCTGGTC GTCAACAGCC GGCAGGGCGG CCTGGGCCTG AAGGACATGG CCGAAGTGCT GCCCACCCTG GGTTCGTCGT TCGAAGCGAT GAAGCTGCAG GGCACCTCGG CGGCCGCCAC CCTCGGCGCC GCCCTGCAGG CCACGCTGGA TTCGGCCGGC GGCGCCGACA AGGCCGCCAG CAACATGAAG AACTTCATGT CGTCCGTCCT GTCGCCGGAG CTGCAGAACA AGGCGAAGAA GAGCCTCAAC CTGGATCTGC GCAAGATCAT CGGTGACGCA CAGACCGACG GTGGCAATCC CTTCGATGCG GCCATGCAGG GAATCATCCA GGCCACCGCA GGCGACCAGA AGAAGATCGG CACCCTGTTC AGCGATGCAC AGGCGAAGAA CTTCGTCCAG CCGATGATCG AGAACTGGGA TACCTACATC CGCGTCCGCG ACAAGGCCTT GAATGGATCG GCGGGTACCA CCGATGCGGC GTATGCCGAT GCGATGCAGA CCGATCCGCA GAAAATCGAA GGCGCCAAGA TCGCTGTGGA CAACCTGTCC AAGGCCTTCG GTGCGGCGCT GCTGCCGGCG GTGGGCGAGG CTGCGGTCAA ACTGACCGAA CTGTTGAACG GGGTCACCTC GTTCGTGCAG GAAAACCCGA AGCTGATCGC CAACGCCACG CAGATCGTGG TCGGCATGCT GGGCATGCGC ACGGCGGTGC TCGGCGCACG CTACGCCTGG ACGTTCCTGC AGGGCCCGAT CCTGGGCGTA CAGAAGGCCT TCCAGCTGTT CCGGGGTGGC AGCCTGCTGG CACAGATGGG GCGCTTCGGG CCGATGGCCA TGCGCCTGGC GTCGGGCTTC CGTGTGGTTG CCACTGCGGT GGCGGCCATC GGTGGCGGGC CGATCACGAT CGCCATCGCA GCGATCACCG CAGGCGCCAT CCTGGTGCGC AAGTACTGGG AGCCGATCAA GGCATTCCTG GGCGGCGTCT GGGACGGCCT GAGCGGTGCA GGCACCGCGG CGATGGGTGA ACTGATGCGC GCGGTTGAAC CACTGCGCCC CGCCTGGGAA GTCATGAGCG GGCTGATCGG CCAGGCGTGG GACTGGCTGT CGAAGATGCT TGCACCTGCA CAGTACACCG GCAACGAACT GTCACGCGTT GCCCAGATCG GCAGCTTCCT CGGTACCGTT CTGATGGAAG GCCTGAGAAT GAACATCCAG CTCATCAGCG GCTTGGTGCA GTACGTCGTC TGGATGGGCA ACGTGTACAC GACCGTCGCG AGCGGGATCG GCAGCGTAAT GAGCATGATG TGGACCGCGA TCAAGTCCGG TGCCGAATCC CTGTTCAACT GGCTCGTTCC GAAGCTGGAT TTCCTCATGC CCTACGTCGA GAAGCTGATG GGGTTCGTCG AAGGAGGCAT TGGCAAGGTC AGTGCGCTGG TCGGCAAGGG CCTGGACTTC GGGAAGGAGG TGCTTGCCGG TGGTGCGGAA GCGATCGGCA ACGGCATGGT GGGTTACACC AACATGCGGG CGGGCGGCCG AGGTGGCCTG GATGACGCCG TGGGCCTGGT CGGCGACGTC GCCACGTTGG ACGCGCCGGG GGCGCGCAAG CGATGGGGAG GCATCAGCGA GGCCGCTCGG GGTCGTACCG CACCCGACAT GCCATCGCCC TCCCCGCGCG GTGTCACCAC CGTGCAGCAA CAACAGACCA ACAACATCAC CATCCACCAG CAACCCGGTG AATCCAGCGA ATCGGTGGCA CGTCGCACGG CCGACGAACT GCAGCGCCGC AACGCGGTTG CTGCCCGTGG CGGCCTGGCA GACAGGAACT AA
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Protein sequence | MANNVQTTTI TIGGSVSKSL KDALSFANDG IKRIGTELTL LDRRLARLST TSKEYARMRT QVDALRASQE ALESIEAKRT ANLEKREKLG SAFGEARGAL GTAVTALAKP VENASGFARQ NQQIGVAANL SRAQVSALGQ AILEQSRATN QGADTLQRSI RLMIDAGMDA QSAQASLGAI GRTTTVTGAS IDDVAQAAAA LQQSFNIDPS RMQSALDVLV VNSRQGGLGL KDMAEVLPTL GSSFEAMKLQ GTSAAATLGA ALQATLDSAG GADKAASNMK NFMSSVLSPE LQNKAKKSLN LDLRKIIGDA QTDGGNPFDA AMQGIIQATA GDQKKIGTLF SDAQAKNFVQ PMIENWDTYI RVRDKALNGS AGTTDAAYAD AMQTDPQKIE GAKIAVDNLS KAFGAALLPA VGEAAVKLTE LLNGVTSFVQ ENPKLIANAT QIVVGMLGMR TAVLGARYAW TFLQGPILGV QKAFQLFRGG SLLAQMGRFG PMAMRLASGF RVVATAVAAI GGGPITIAIA AITAGAILVR KYWEPIKAFL GGVWDGLSGA GTAAMGELMR AVEPLRPAWE VMSGLIGQAW DWLSKMLAPA QYTGNELSRV AQIGSFLGTV LMEGLRMNIQ LISGLVQYVV WMGNVYTTVA SGIGSVMSMM WTAIKSGAES LFNWLVPKLD FLMPYVEKLM GFVEGGIGKV SALVGKGLDF GKEVLAGGAE AIGNGMVGYT NMRAGGRGGL DDAVGLVGDV ATLDAPGARK RWGGISEAAR GRTAPDMPSP SPRGVTTVQQ QQTNNITIHQ QPGESSESVA RRTADELQRR NAVAARGGLA DRN
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