Gene Smal_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0619 
Symbol 
ID6477565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp732657 
End bp733949 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID642729764 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002027007 
Protein GI194364397 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.869359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.27324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCAC GCCCGGTCCA TCGCCTGCGC CGGCGCCTGG TGGTGGCGTT CACCGTCTTC 
GCGCTGCTGA TTGCCTCGGT CTTCGGAGTG TATTCGCTGG TCTTCATGTA TGCGGTGGAG
GACAGCATCT TCAACGCCCA GCTGGACCGT GAAGCGCAGG CGCAGCGTGC CTACCATGCC
CGCACGGGGC ACTGGGGCCT GCCCGCCGAT GCAGCGGTCC AGCTGCATGA CTCACCTGCC
ACATTTCCCG CCGACCTGCG GACCGTGTTC GCGGAGGAGC CCTGGCGCTC GGAGTTCGGC
GGCGAGCAGG GCCGCCACTA CCACGTCAAG CGATTGCAGG CCTCCCCGTC CATGCCTCCC
GCGTGGCTGG TGTATGAAGT CAGCGAACAG CTGGTGGTCC GTCCGGTCCG CGATAGAGTA
GTGCTGCTGC TGGGCGGTAC GGCGCTGGGC ATGATCCTGG TCGCGATCCT GCTCGGGCTT
TGGCTGGCGC GCCGCGCCAC ACGCCCCCTG TATGCGCTGG TCCATGAGGT TGAAGCGCTG
CAACCACCGT CTGGACAGCG CACTCACCTG GCAGACCGTT TCGGCGATGA CGAAATCGGG
GTACTTGCGC GCGCGCTGGA TGGCTTGTCG GAGCGGGTTG CCGCGTTCAT CGAACGGGAG
CATGCCTTCA CCCGTGATGC CAGCCACGAG CTGCGTACGC CGTTGAGCGT CATCTCCAGC
GCGGCCGGCC AGTTGCTCGG TGAGGCTGGA CTGTCCGCAC GCGGGCAACA GCATCTGCAG
CACATCCGCC TGTCGGCGCT GCAGCTGCAG CAAGCCATGA CCGCATTGCT GGCGCTGGCT
CGCGAAGAAC CTGCAGACGC ATGTTGCGGG CCGGTCAGAC TCGTTCCGCT ACTTGAGAGA
GTGATCGTCG AGCAGTCACC GCTGTTGGCC TCGCGGCCGG TGGACGTGCA ACTCTCTGTG
CCCCGCGGCG CAGCACTGCG CGCGCCAGAG GCTGCGCTGC AGGTGGTGCT GGCCAATCTG
ATCGGCAACG CCTTCGCGCA CACGCCGCAG GGCACGGTAT CGATCACGTT CGAAACAGGC
GTTCTGCAGG TCTACAACAC CGCTTCCTCC ACACCGTCGC TGGGCAGCTG GCCCACGCCC
CGCCCCTTCC AGAAGCGCGC AGACAGCAGC GGCAGCGGAT TGGGGCTGGA GATCATGCGC
CGGCTTTGCG ACCACCACGG CCTGCATCTG GACATACAGG CCAATGACGG TGGTGTTCAT
GCGCAGCTTC GAGGTCAGCA ATGCGGCCCA TGA
 
Protein sequence
MRPRPVHRLR RRLVVAFTVF ALLIASVFGV YSLVFMYAVE DSIFNAQLDR EAQAQRAYHA 
RTGHWGLPAD AAVQLHDSPA TFPADLRTVF AEEPWRSEFG GEQGRHYHVK RLQASPSMPP
AWLVYEVSEQ LVVRPVRDRV VLLLGGTALG MILVAILLGL WLARRATRPL YALVHEVEAL
QPPSGQRTHL ADRFGDDEIG VLARALDGLS ERVAAFIERE HAFTRDASHE LRTPLSVISS
AAGQLLGEAG LSARGQQHLQ HIRLSALQLQ QAMTALLALA REEPADACCG PVRLVPLLER
VIVEQSPLLA SRPVDVQLSV PRGAALRAPE AALQVVLANL IGNAFAHTPQ GTVSITFETG
VLQVYNTASS TPSLGSWPTP RPFQKRADSS GSGLGLEIMR RLCDHHGLHL DIQANDGGVH
AQLRGQQCGP