| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0402 |
|---|
| Symbol | |
|---|
| ID | 6478272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 478941 |
|---|
| End bp | 480119 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642729547 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_002026790 |
|---|
| Protein GI | 194364180 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00394756 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.302831 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CCCTTTCCCT TGACCCCGCG CCGGCCCTGC CGTCGGTACA GCGGTTGCTG
CAGCAGGTCC ACCCGCAACG CCTGGTCGGC GCGGTGGTGC TGGTGCGCGA GCACGGCGTG
CTGCGTCATG CCAGCGCCAC CGGCCTGGCC GATCGTGAAT CGGGCGCCGC GATGCAGCGT
GACCAGTTGT TCCGGCTGGC ATCGGTCAGC AAGCCGCTGC TGACCACGGT GATCCTGCGT
CTGGTGGCCG ATAGCGTGCT GGACCTGGAT GCGCCGGTAC AGCGCTGGTT ACCGGACTTC
CGCCCGGCGC TGGCCGATGG CAGTACGCCG CCGATCAGCC TGCGCCAACT GCTCAGCCAT
AGCAGCGGGC TGGGTTACCG CTTCCTCGAA GCCGATGCGG ATGGCCCGTA CGCCCGGGCC
GGCGTCAGCG ATGGCATGGA TGCGAATCCG CTGACATTGG CCGACAACGT GCATCGCGTC
GCGCAGGCGC CGCTGCTGTT CGAGCCGGGG AGCCAATGGT TGTACTCGTT GGGCGTGGAT
GTGGCCGGTG CCGTGGCCGA AGCCGCGACC GGTGAAACGC TGCAGGCACT GTTCGAGCGC
TTGCTGGCCG CACGCTTGGG CCTGCGCGAC ACCGCATTCG CGACCACCGA TGCTGCACGG
CTGGCCACGC CGTATGTGAG TGACACGCCG CAGCCGCATC GCCTGCAGGA AGGCGAAGTG
GTCGCACCGT TCGAGGGTAC GGTCGGCATC GAATACAGCC TCGCCCGTGC TACCGATGCC
AGCCGTTTCC CTTCGGCCGG TGCTGGACTG ATTGGCAGCG CCGACGAGGT GATGGCGGTG
CTGGAAGCAC TGCGCGACGT ACAGGCCTCG AATCTGTTGC CGCCCGCGCT GGTGGCCGAG
ATGGCCACTC CGCAGGTGGG CGAGCAGGGG CCGCCGGAGC CGGCCGGCTG GGGCTTCGGG
CTGGGCTTTG CGGTGCTGCG CGATGCCGCC GCCAGTGGCA CGCCACAAAG CGAAGGCAGC
TGGCGCTGGG GCGGTGCCTA TGGCCACAGC TGGTTCGTTG ATCCCGCGCG CGGGCTGAGC
GTGGTGGCGC TGACCAACAC CCTGTACGAA GGCATGGATG GCGCCTTCGT CGATGAACTG
CGTGACGCCG TCTATGCTGA TCTGGAGGCT GCGCGATGA
|
|---|
| Protein sequence | MNAALSLDPA PALPSVQRLL QQVHPQRLVG AVVLVREHGV LRHASATGLA DRESGAAMQR
DQLFRLASVS KPLLTTVILR LVADSVLDLD APVQRWLPDF RPALADGSTP PISLRQLLSH
SSGLGYRFLE ADADGPYARA GVSDGMDANP LTLADNVHRV AQAPLLFEPG SQWLYSLGVD
VAGAVAEAAT GETLQALFER LLAARLGLRD TAFATTDAAR LATPYVSDTP QPHRLQEGEV
VAPFEGTVGI EYSLARATDA SRFPSAGAGL IGSADEVMAV LEALRDVQAS NLLPPALVAE
MATPQVGEQG PPEPAGWGFG LGFAVLRDAA ASGTPQSEGS WRWGGAYGHS WFVDPARGLS
VVALTNTLYE GMDGAFVDEL RDAVYADLEA AR
|
|---|
| |