Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_7006 |
Symbol | |
ID | 8716274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013733 |
Strand | - |
Start bp | 27549 |
End bp | 28520 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391748 |
Protein GI | 284005930 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.68287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACGC AACAGGCAAA GCTGCTATCC CTTCCTGACC TCTTAACCAA GCTGGGCCAT CAACCGGCTA GAACCCTGAA AGCAGGGAAA GAGCTTTGGT ATTGTTCTCC TTTCAGAAAC GAGCTGGAGC CCTCCTTCCA TACCAGCTTC TTGGGCGGCA AGTGGATCTG GAACGATTTC GGCGATACCG GCGGCAATGT GCTCGAGTTC GTTATGCGCT ACTATAACAC CGATGTGAGC GGTGCCTTGG CTCAGTTGGA TCACCTGATG GGGAGCCCAC TCCAGCAAAG CCGGTCGGCT ACATCCCTGC CAACCAAGGA GCCCATAGTA TCTGCTAGTC CTCTCGACGA GCAGCAAACG CTCAGCTTAG AGACCGTACG CCCCCTTAGT GTTGACTCCA GTAAGGGCAG GGCATTGATC CACTATCTGA CCCATCAACG GGGGATTGAT CCCATGCTGG CGGCTAAGTA CCTGCTCGAA GTGCAGTACC GCAATCAACT AACCGGTAAA ACCTATTTCG CCGTCGGCAT CAACAATGAG ACAAAAGGCT ATGAAATCAG AAACGCCTAT TTTAAGAGCT CACTGGGCAG AAAAGGCGTC AGCTTCATCG AAGGCAAGAA GAAAGGCCAC ATTGCCGTCT TCGAAGGCTT TATGGACTTC CTGGCCGCGC TTACCTACTA CCAGTCGAGC GACCTAGCTA TGTTTCAGGA ACTGGTGCAG GGCGATGTGT TGATCATGAA TTCGGCTGCT TTTTACCAGC GCACCAGCGA GCTGCTCCGG GCCGGTAGCT ACACCAAAGT CGCCTTGTAC CTGGACAACG ATACAACCGG CCACAAAGTC AGGGATCTGA TTCAGGAGCA ATTCCCCCCG TACACGACCG ATTACTCCAA GCTGTACAAA GATTACAAAG ATTTCAATGA GTTCTTGCTG GCTCAGCTAA CTGATCGCAG CTCTACAAGG TCCAAGGGCT AA
|
Protein sequence | MNTQQAKLLS LPDLLTKLGH QPARTLKAGK ELWYCSPFRN ELEPSFHTSF LGGKWIWNDF GDTGGNVLEF VMRYYNTDVS GALAQLDHLM GSPLQQSRSA TSLPTKEPIV SASPLDEQQT LSLETVRPLS VDSSKGRALI HYLTHQRGID PMLAAKYLLE VQYRNQLTGK TYFAVGINNE TKGYEIRNAY FKSSLGRKGV SFIEGKKKGH IAVFEGFMDF LAALTYYQSS DLAMFQELVQ GDVLIMNSAA FYQRTSELLR AGSYTKVALY LDNDTTGHKV RDLIQEQFPP YTTDYSKLYK DYKDFNEFLL AQLTDRSSTR SKG
|
| |