Gene Slin_7006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_7006 
Symbol 
ID8716274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013733 
Strand
Start bp27549 
End bp28520 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391748 
Protein GI284005930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.68287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC AACAGGCAAA GCTGCTATCC CTTCCTGACC TCTTAACCAA GCTGGGCCAT 
CAACCGGCTA GAACCCTGAA AGCAGGGAAA GAGCTTTGGT ATTGTTCTCC TTTCAGAAAC
GAGCTGGAGC CCTCCTTCCA TACCAGCTTC TTGGGCGGCA AGTGGATCTG GAACGATTTC
GGCGATACCG GCGGCAATGT GCTCGAGTTC GTTATGCGCT ACTATAACAC CGATGTGAGC
GGTGCCTTGG CTCAGTTGGA TCACCTGATG GGGAGCCCAC TCCAGCAAAG CCGGTCGGCT
ACATCCCTGC CAACCAAGGA GCCCATAGTA TCTGCTAGTC CTCTCGACGA GCAGCAAACG
CTCAGCTTAG AGACCGTACG CCCCCTTAGT GTTGACTCCA GTAAGGGCAG GGCATTGATC
CACTATCTGA CCCATCAACG GGGGATTGAT CCCATGCTGG CGGCTAAGTA CCTGCTCGAA
GTGCAGTACC GCAATCAACT AACCGGTAAA ACCTATTTCG CCGTCGGCAT CAACAATGAG
ACAAAAGGCT ATGAAATCAG AAACGCCTAT TTTAAGAGCT CACTGGGCAG AAAAGGCGTC
AGCTTCATCG AAGGCAAGAA GAAAGGCCAC ATTGCCGTCT TCGAAGGCTT TATGGACTTC
CTGGCCGCGC TTACCTACTA CCAGTCGAGC GACCTAGCTA TGTTTCAGGA ACTGGTGCAG
GGCGATGTGT TGATCATGAA TTCGGCTGCT TTTTACCAGC GCACCAGCGA GCTGCTCCGG
GCCGGTAGCT ACACCAAAGT CGCCTTGTAC CTGGACAACG ATACAACCGG CCACAAAGTC
AGGGATCTGA TTCAGGAGCA ATTCCCCCCG TACACGACCG ATTACTCCAA GCTGTACAAA
GATTACAAAG ATTTCAATGA GTTCTTGCTG GCTCAGCTAA CTGATCGCAG CTCTACAAGG
TCCAAGGGCT AA
 
Protein sequence
MNTQQAKLLS LPDLLTKLGH QPARTLKAGK ELWYCSPFRN ELEPSFHTSF LGGKWIWNDF 
GDTGGNVLEF VMRYYNTDVS GALAQLDHLM GSPLQQSRSA TSLPTKEPIV SASPLDEQQT
LSLETVRPLS VDSSKGRALI HYLTHQRGID PMLAAKYLLE VQYRNQLTGK TYFAVGINNE
TKGYEIRNAY FKSSLGRKGV SFIEGKKKGH IAVFEGFMDF LAALTYYQSS DLAMFQELVQ
GDVLIMNSAA FYQRTSELLR AGSYTKVALY LDNDTTGHKV RDLIQEQFPP YTTDYSKLYK
DYKDFNEFLL AQLTDRSSTR SKG