| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6876 |
|---|
| Symbol | |
|---|
| ID | 8716144 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | + |
|---|
| Start bp | 40154 |
|---|
| End bp | 43511 |
|---|
| Gene Length | 3358 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGG GCTTAATTAA ATTCTCCATA CGCAACCGAT TCATCGTCCT GCTGATTGCA
GCCGGGCTGT TTGGATGGGG GGTGTACTCC GTCAGAACGA GTAAGATTGA TGCAATTCCC
GATCTGTCGG AGAATCAGGT CATTGTCTTT ACCGAATGGA TGGGCCGCTC TCCGCAGCTC
ATCGAAGACC AGATTACCTA CCCATTGGTA ACGAACCTCC AGGGTCTTCC GCAGGTGAAA
TACGTGCGGG GTACGTCGAT GTTCGGCATG AGTTTCGTCT ATGTCATTTT CAACGACGAC
ACGGAGGTGT ATTGGGCCAG GGAGCGGGTA CTGGAACGGC TCAACTATGC GGCCCGGCTG
CTGCCGGGGG GCGTTTCGCC CACGCTTGGC CCCGATGGAA CAGGTGTGGG CCATATTCTG
TGGTACACGT TGGACGCGCC CGGCATGGAC CTCGGCGAAC AGCGGGCCGT ACAGGACTGG
TACGTCAAGT TTGGGTTGCA GAACGTACCG GGCGTGGCCG AAATCGCGTC GTTCGGTGGG
TTTCAAAAGC AGTACCAGGT GACGCTGGAC CCCAACAAAC TGACCTACTA TGGTTTGTCC
GTACCGCAGG TGATCGGGGC GATCCGGTCC AATAACAACG AAGCCGGGGG CCGCAAGTTT
GAACTCAGCG GCATCGGCTA CATCATCAAA ACAACGGGCT ATCTGCAATC GGTCGAGCAA
ATCCAGAACA TCCCGCTCAA GACCATCAGT AGCGTCCCCG TGCGCGTGGC CGACGTAGCG
ACGGTTCAGA TGACGGGCGA AACCCGGCTG GGCATCTTCG ATCTGAACGG GCAGGGTGAG
GCTGTGGGCG GTATTGTGGT GATGCGCTAC GGCGAGAACG CCGACGAGGT GATTGGCAAC
GTTAAAAAGA AGATGGAAGA GGTCGCTAAG GGACTGCCCG AAGGCGTAAC GTTCAACATC
GTCTATGACC GCAGCGGGCT GATTCAGGAA TCGGTTGCGT CCATCACCCA TACACTCATT
GAAGAAATGA TTGTGGTGTC GCTGGTGGTG ATTCTGTTCC TGTTGCACTG GCGGTCGGCC
ATCAGCATCA TTATTCAGAT TCCGATCACC ATCGCCACGA GCTTTATCCT GCTCAACGCC
TTCGACATCT CCTCCAACAT CATGTCCCTG ACGGGCATCG CGCTGGCTAT CGGGGTAATC
GTCGATAACG GCATTATCAT GGCCGAAAAT GCCTATAAAA ACTTAGCGAC CCGGCAGGCT
GAGTTAACGG CAGAACAGGA TGGGAAACAA TCGGGTACGG TATCGGCTAC GAATGGCAAC
GGACAAGGGG AGTATATTAA TGGGCAGTCG GACCCCGGAT CGTCGCTCCG GCGCACCGGC
CCGGTTAAAC CAACCCCGCA AACGCGCTAA TATCATGTGG AAGAAGATAA AGAAATGGTT
CGGCTTCGGA CCTAAGAATT ACGTCGAAAT TCCCGACGAA GAACGGCTGG CGATCATCGA
GCGGTCAAGT ATTCAGGTCT CGCGGGGGGT GTTCTATTCA ACTATCATCA TCATCACGTC
GTTTCTGCCG GTGTTTCTGC TGACCGGGCA GGAAGGAAAG TTATTTCACC CACTGGCCTG
GACCAAAACG TTTATCCTAC TGGTTGATGC GGTGCTGGTC GTAACGCTGG CCCCGGTCAT
GCTGTCGCTG TTCATGAAGG GCCGCTTCAA GGATGACCAT GCCAATCCGA TCAACCGCTT
TCTGGAGCGG ATCTATGAAC CCATTATTCG CTGGGTAATG CGCTGGCGCA AAACGACCAT
TGGTATCAAC CTGTTAGCCC TGGCTATTAG TATACCAATG CTGATGAGTC TGGGTTCGGA
GTTTATGCCG CCGTTGGACG AACAAAGCAT TCTGTTCATG CCGGTTACGC TACCCGACGT
ATCGAACGCC GAAGCTAAAC GGATTTTGCA GGTGCAGGAT AAGTTGATTA AGTCGGTGCC
GGAAGTCGAT AAGGTGTTGG GGAAAGCAGG ACGGGCATCG ACGGCAACCG ACAACTCACC
GATTAGTATG ATCGAGACCA TCATCATGCT CAAACCCAAA ACGCAGTGGC GGGAAGGCAT
CACTAAGAAA GACCTCATCA ACGAGTTGGA TGCCAAACTT CAGATTCCGG GCGTGGTTAA
CGGCTGGACA CAGCCCATTA TCAATCGCAT CAACATGCTC TCGACGGGTA TTCGTACCGA
CGTAGGCATC AAAGTACACG GGCAGTCGCT CGACAGCATT TACGCCGTCT CGGAACAGGT
GAAAGCAGCT TTGGAAGGCG TTCCGGGCGT GAAAGACCTG TACGTCGAAC CCGTCACGGG
CGGCAAGTAT CTGACTATTG ATGCAAACCG CGAGGCCCTG GGCCGCTACG GATTGAGCGT
GGACGACGTG AATGGCGTGG TTGAATCGGC CATTGGCGGC TCTCCCATCG GGCAGACCAT
CGAAGGACGA CGGCGATTCT CGATCAACGT GCGGCTGGCG CAGGATTACC GCAACAGCAT
CGAACGCATC CGGCGCATTC CCATCGCTAC GGCCGCATTC GGTACGGTTC CGCTCTCGGC
AGTGGCGACG GTGAAGTTCG AGGATGGCCC CCCGATGATT ACCTCCGACA ATGCCCTGTT
ACGGGGGGCG GTGATGTTCA ATGTTCGTGA CCGCGATCTG GGGGGTACGG TGCAGGAAGC
CATCAATAAA GTAGGGAAAG AATTGAAACT GCCCAACGGT TATTTTCTGG AATGGAGCGG
GCAGTACGAA AACCTGATTC GGGGTAAGCA AACGTTGCTG ATTATTGCCC CCGTGGTGCT
GGTTATCATT TTTCTCTCGC TCTACCTCGC TTTTGGCTCG GCACGGGAAG CGTTTCTGAG
TTTGATTACG ATTCCCTTCG CGCTGATCGG CGGGGCCTAC ATGGTCTATT TCTACGGGGT
GAACCTGTCG GTGGCCGTGG CGGTAGGTTT TATCGCCCTA TTTGGAATTG CGGTCGAAAC
GGGCGTAGTG ATGGTGATCT ACCTCAACGA TGCCATGAAA CAATTGGTCG CCAAACGCGG
CAACTCCCGC GAGACTATCA GCCGTGACGA ACTACGCGAA TACGTTATTA ACGGCGCGGC
CAAACGGCTT CGACCCAAAA TCATGACCGT ATCGGTGGCC CTGTTCGGCT TAGTGCCGGT
GCTGTGGGCA TCGGGGGTTG GGAGCGACGT GATGCTGCCC ATCGTGCTGC CCATGATCGG
GGGGGTATTG ACCTCCTCCA CGCACATTCT GTTGGTGACT CCGCTAATTT TTTTACTGAC
AAAAGAGTAT GAACTTAAAA AATTTGGTAA ACTGGATGTG CTGGAAGCCT CTCACTAA
|
|---|
| Protein sequence | |
|---|
| |