14 homologs were found in PanDaTox collection
for query gene Slin_6876 on replicon NC_013732
Organism: Spirosoma linguale DSM 74



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013731  Slin_6821    85.73 
 
 		 3367 bp  1055    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.831673 
 
 
-
 
NC_013732  Slin_6876    100 
 
 		 3358 bp  6657    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_3054  heavy metal efflux pump, CzcA family  86.52 
 
 		 1299 bp  81.8  0.000000000001  Pedobacter heparinus DSM 2366  Bacteria  hitchhiker  0.000138497  decreased coverage  0.000798873 
 
 
-
 
NC_010814  Glov_3079  heavy metal efflux pump, CzcA family  90.48 
 
 		 3138 bp  77.8  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  0.931576  n/a   
 
 
-
 
NC_009441  Fjoh_3069    82.35 
 
 		 3232 bp  69.9  0.000000005  Flavobacterium johnsoniae UW101  Bacteria  decreased coverage  0.000491147  n/a   
 
 
-
 
NC_013061  Phep_3053  heavy metal efflux pump, CzcA family  80.26 
 
 		 1938 bp  63.9  0.0000003  Pedobacter heparinus DSM 2366  Bacteria  unclonable  0.000102384  decreased coverage  0.000425378 
 
 
-
 
NC_011146  Gbem_2164  heavy metal efflux pump, CzcA family  87.3 
 
 		 3138 bp  61.9  0.000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2058  heavy metal efflux pump, CzcA family  88.14 
 
 		 3138 bp  61.9  0.000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000624585 
 
 
-
 
NC_007517  Gmet_1547  heavy metal efflux pump CzcA  91.11 
 
 		 3138 bp  58  0.00002  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00394954  normal  0.706432 
 
 
-
 
NC_007484  Noc_1535  heavy metal efflux pump  94.44 
 
 		 3225 bp  56  0.00007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2926  CzcA family heavy metal efflux protein  90.91 
 
 		 3141 bp  56  0.00007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.377794  n/a   
 
 
-
 
NC_011145  AnaeK_4232  heavy metal efflux pump, CzcA family  92.31 
 
 		 3282 bp  54  0.0003  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_4255  heavy metal efflux pump, CzcA family  92.31 
 
 		 3282 bp  54  0.0003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_11758  putative copper/silver resistance-related transport membrane protein  96.67 
 
 		 3753 bp  52  0.001  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>