Gene Slin_6861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6861 
Symbol 
ID8716129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp28486 
End bp29352 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391609 
Protein GI284005790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATT CCTTAACGAA ATCAATGCTG GCCATTGCCC TGCTGGCTGG CTTAATGGCC 
CGGCCCGCGT CGGCCCAACT GAGTATGCCC GAACCATCGC CATCGGCTAC GGTGATGCAG
AAAATCGGCT TTACCGACCT GACGATCAAC TACTCCCGCC CGGCGGTGAA GGGCCGGGTC
ATCTTCGGCA AGCTGGTTCC CTACGGCGAG TTGTGGCGCA CCGGCGCGTC GGATGCCACC
ATCCTGACCA TCTCCGACCC GATGACTGTA GCCGGAAAAC CGCTGCCCGC CGGGAAGTAT
TCGCTCTTCA CCATTCCCAC TCGCACTGAG TGGACGGTGA TCCTGAATTC CTACACCGAA
GGGCACGGCA CGACGGGCTA CGACGCAAAA AACGATGTGC TGCGGTTTGC CGTCAAACCT
GATTCGTCGG CGCGGTTCTA CGAATCGTTC ACCATCGAGG TGCAGGATGT CGTGAAAAAT
CAGGCCAACC TGTACCTGAC CTGGGCCAAT ACGTCAGTTC ATTTCCCGCT CGTGAGCAAT
GCCGACGACC GGATTACGAC CGAAATTTTG AAGCGCACAG CCTCGGCTAC CGACGAGGAG
CCGGGCGTAT TTTACCAGTC GGCCCTGTAT TATTTCGACG CGGGTAAAGA CCCGAAACAG
GCTTTGGCCT GGGCCACTAA AGCCGCCACC CTCAAACCGG CCTTCAACTA CCTGCACCTC
CAGGCTAAGT TGCTGGCACA AACAGGCGAT TATAAAACGG CCATTGCTGT AGCCCGCAAA
TCGTCGGAAT TAGCCGCCGA AAAGAAGTTT ACCGAGTTCG TCACGCTGAA CAATCAATTG
ATTGCCGGGT GGGAGAAGAA ACTGTGA
 
Protein sequence
MTNSLTKSML AIALLAGLMA RPASAQLSMP EPSPSATVMQ KIGFTDLTIN YSRPAVKGRV 
IFGKLVPYGE LWRTGASDAT ILTISDPMTV AGKPLPAGKY SLFTIPTRTE WTVILNSYTE
GHGTTGYDAK NDVLRFAVKP DSSARFYESF TIEVQDVVKN QANLYLTWAN TSVHFPLVSN
ADDRITTEIL KRTASATDEE PGVFYQSALY YFDAGKDPKQ ALAWATKAAT LKPAFNYLHL
QAKLLAQTGD YKTAIAVARK SSELAAEKKF TEFVTLNNQL IAGWEKKL