Gene Slin_6858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6858 
Symbol 
ID8716126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp25102 
End bp26151 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391606 
Protein GI284005787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.809186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.870097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTAA TTACGCTTGT TGTTTCAATT GTCAGCTTTT TAGCTACCCT ACATCTGCCT 
TCTGAGGTCA GTGAGCGTGT AGCTTCTGGT CATCTACCAG TCGTCGTTGC TGATGAAACA
GGAATGGTAC ATTTGGTCTA TGGTCAGGAT TCGACTATTT TCTATGCTGT AGCTACCAAA
AAACATGCTT CATTTAGCCA ACCGATTGCG GTTGCTATGT TATCGCAATT AGTCGCTGGG
GCCAAACGAG GGCCACAGAT AGCAGCAACT GAAAACTACG TTGTCATCAC CGCCGTCAAT
CGAGCGGGTA ATCTGTTCGC CTATTCGCTT GATCGGAAAA GTGGCAGATG GTCGTCTGCG
GTACGAATTA ATGATGTACC CGAAATAGCC AAAGAAGGGT TCCAGGCGAT AGCCAGTGCG
TCGCCAAGCG TATTTCACGC TACCTGGCTG GACCTACGTG AGGACAAACG GAATAAAATC
GTAATGACTA CCTCCCGCGA TGGGGGACGC ACTTGGTCAA CTAATCGGGT GGTGTATCAC
TCACCCAGCG GTACTGTATG TGAATGCTGC AAAGTGTCAA TTGCCGCCAC AGGAGACGAG
GTGTATATCC AATTCCGAAA CTGGCTTAAT GGCTCCCGTG ATTTGTACCT GGCCCATTCG
GCTAATGGCG GGGCGACCTT TGCTCCGGCG CAAAAACTTG GCTCCGGCAC TTGGAAATTG
AATGCTTGCC CAATGGATGG GGGTGCGGTA ACGCTGTCGT CAGCGGGTCA GCCACTAACT
GTCTGGCGAC GAGAAAATAC CTTGTTTACC TGCCAACCGG GTCAAGCCGA ACAAGCCATT
GGTACAGGTC GAAATATAAC GGCTGCAACC GGCCCGTCAG ATACTGCTGT AGTTTGGGAT
GAAGGGGGTA TAGTTTGGCT AAAGCGTAAT GGAAATGATC CGATCAACCT TGGCAAAGGC
CAGCTACCGA GCGTCGCGCT GACCGATCAG GTAGCCATAT GCGTTTGGGA AGCCGACGGA
CAAGTGATGA TGAAAATAGT ACATCTCTGA
 
Protein sequence
MWLITLVVSI VSFLATLHLP SEVSERVASG HLPVVVADET GMVHLVYGQD STIFYAVATK 
KHASFSQPIA VAMLSQLVAG AKRGPQIAAT ENYVVITAVN RAGNLFAYSL DRKSGRWSSA
VRINDVPEIA KEGFQAIASA SPSVFHATWL DLREDKRNKI VMTTSRDGGR TWSTNRVVYH
SPSGTVCECC KVSIAATGDE VYIQFRNWLN GSRDLYLAHS ANGGATFAPA QKLGSGTWKL
NACPMDGGAV TLSSAGQPLT VWRRENTLFT CQPGQAEQAI GTGRNITAAT GPSDTAVVWD
EGGIVWLKRN GNDPINLGKG QLPSVALTDQ VAICVWEADG QVMMKIVHL