| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6739 |
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| Symbol | |
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| ID | 8716005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013731 |
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| Strand | + |
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| Start bp | 100949 |
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| End bp | 103447 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003391494 |
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| Protein GI | 284005674 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.616271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.465298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATTA CTTTGGCCCA AACGCCAACC GGAGTTCCCA CGCAACCCGT TCTCACTCAA
TCGAGCCAAC CCGCTCATAC TCCAGTAGGA GAAACGGCAT CAAAAGGCAA CGCAAAAATT
TCGGGTTATG TCGTCGACTC TACGCTGACC AAAGCAGTTG AATATGCCAA CATCGCCGTC
TACAATACAG CTACCGATAA ACTTGTCGAC GGCACGGTCG CCGATGATAA AGGTAAATTT
ACGCTCACTA AAGTAGCGCC CGGTACCTAC AAACTGCTGA TCTCCTTTCT AGGATATAAC
GTCAAACCGA TTGAAAATGT AGTAATTACC AAAGGTCAGA TCAAGGATAT GGGTGTTATT
AGGCTTAGTG CCAGTACGCG TACCCTGGGT GAAGTAACCG TCGCGGGAAA AAAAGCCCTG
GTGGAAGACA AAGTGGATCG GCTCATCTAC AATGCCGATA ATGATGTGGC GGCTAAGGGG
GGCGATGCCC TGGATATTTT GCGGAAAGTG CCCATGCTCG CTGTCGATCC GACGGGTAAT
GTCTCCTTGC AGGGCAGTAG CAGCGTGCGG GTGCTGATCA ACGGTAAACC CTCCTCCATT
CTTGCGGGAA ATCTGGCCGA TGCGCTCCGG CAAATTCCGG CGGATTTGAT CAAAACGGTC
GAGGTCATTA CCTCCCCTTC GGCAAAATAC GATGCCGAAG GAAGTGGGGG GATTATTAAT
ATCATTACCA AGAAAAATAC GCTTCAGGGG CTGCACCTCG ACATGGACGG GGGAACGGGT
AACCGCAATT CGACGCTGGG TTTAAATGGC AGTTTCCGAA AAGGAAAACT GGGCCTAAAT
CTCAACGGCA ATGGTCGAAT TATTTATAAT CCATCAGCCT CCGACCTGAA TCAAACAACC
TTCTTGGCAT CCGGAGCTAC ACCGGTTCAG ACCCGTCAGC GAATCGATGC CTTCGACAAA
GGCACCTTTG CGCAGTATGC GTTAGGCATG GATTATGATC TGCCAAAAAA TCAATCGCTA
ACGGCCGGGG TCCGCTTGGG GATTCGTAAT TTAAGCCAAG ATCAGCATCA GTTAACGAAC
ACGCTTTCCA GCGAACGCGT TGCTGCTCCG ACCAAACGGG ATGTTAACAC GCAGAATCTA
TCCAATTCGA TTGACGTGAA TATTGACTAC CTGCATACCT ACGAGGGATC GTCGAAAGAG
TTCAGCTTTT CAACCCAGTA TAGCCGGAGT ACTTTGACCA ACAACTTCGA GGCCAACAAC
CTGGATACGT TGGGGCTCAT CAAAACCCGG CAACAAAACC TTAACTATGC CACCAACCAG
GAATTTATTC TTCAGGCCGA TTACCAAACC CCTGTTAGTA AAGTGCTCCA GCTAGAGTTC
GGGGCCAAAA ACACGCTTCG CCGGGTAACC AGTGATTACA ACTACCTGCT GGCGGGGCCA
ACAACCGACT TTGTGGTTGA TCCCAGTCGC CCGTCGGGTT TGCTCAACTA TGACCAGAAC
ATCGCCGCTG CGTACGTGGC CACCACGTTT ACCCTGCCCG GTGGGATCGT CCTGAAGCCG
GGTCTACGCT ATGAATACAC CAGCATTCAG GCCCAGACCG GAGGGTCCCA GACTGGAGGG
AGCACGGGCG TACCAATGTC TATCTTGATT CCCGATTATG GACGCTTACT ACCCAGCATC
AATGTGGGTA AAAAGGTGGG GGAAAGCAGC AGTCTAAAAT TTGGGTACAC CCGCCGTATC
CGCCGACCGT TTATCGACGA TCTGAACCCC AACTTCAATA CGGCTAACCC GCTCAATATC
CGCGTGGGAA ACCCTTATTT AAAGCCTGAA ACCGTTGATC GGATTGAAAT TGGTTATAGC
ACCCAACTCA AGAAAACATA CCTTAATTTT TCGCTCTACA CCCGCTTGAA TACCGATGAT
ATTCAGTCGA TTAGTCAGCG TTCGGATACG TTGGTGGGTG CCGTCGTGAC GCGGGTGACC
AACCTGGGGA AGGAATACAA TTATGGCACG AATTTGTTTG CTACGATTAA TCTGACGCCC
CGATGGAGCG TCAATGCTAA CCTGGATATT ATGTACCGCT TTATTCAGGG GCTGGCTCTG
GATATTAATG GTCTGTCGAC CACCATCAGC AATCAGGGTT TCCGGTGGGG TGGACGGATG
GATACCCAGA TACAATTCGA TAAAGGGTGG GTACTACAGG CCAACCTTGG TTACCGGGGT
AAAGATATTG CCTTGCAGGG TTACCGAATT GGCTTCGCTC AGTATTCGCT GGGAGCCCGG
AAAAGTTTTA CCAATAAACG GGGTAGTGTC GGCTTGGTGG CGGAGAATTT TCTAACGCAA
GGGATGGGCT TTACCTCGGT GCTGAACTCG GCCCAGTTCA ACCAGGACTT CCGCCAGTAC
ATTTATAATT CCAGCGTTCG GGCTACATTC AGTTATAAAT TTGGAAGCCT GAATGGAGCC
AGGGTGAAGA AAAGTAAATC CCTAAGCGAA GAAAATTGA
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| Protein sequence | MGITLAQTPT GVPTQPVLTQ SSQPAHTPVG ETASKGNAKI SGYVVDSTLT KAVEYANIAV
YNTATDKLVD GTVADDKGKF TLTKVAPGTY KLLISFLGYN VKPIENVVIT KGQIKDMGVI
RLSASTRTLG EVTVAGKKAL VEDKVDRLIY NADNDVAAKG GDALDILRKV PMLAVDPTGN
VSLQGSSSVR VLINGKPSSI LAGNLADALR QIPADLIKTV EVITSPSAKY DAEGSGGIIN
IITKKNTLQG LHLDMDGGTG NRNSTLGLNG SFRKGKLGLN LNGNGRIIYN PSASDLNQTT
FLASGATPVQ TRQRIDAFDK GTFAQYALGM DYDLPKNQSL TAGVRLGIRN LSQDQHQLTN
TLSSERVAAP TKRDVNTQNL SNSIDVNIDY LHTYEGSSKE FSFSTQYSRS TLTNNFEANN
LDTLGLIKTR QQNLNYATNQ EFILQADYQT PVSKVLQLEF GAKNTLRRVT SDYNYLLAGP
TTDFVVDPSR PSGLLNYDQN IAAAYVATTF TLPGGIVLKP GLRYEYTSIQ AQTGGSQTGG
STGVPMSILI PDYGRLLPSI NVGKKVGESS SLKFGYTRRI RRPFIDDLNP NFNTANPLNI
RVGNPYLKPE TVDRIEIGYS TQLKKTYLNF SLYTRLNTDD IQSISQRSDT LVGAVVTRVT
NLGKEYNYGT NLFATINLTP RWSVNANLDI MYRFIQGLAL DINGLSTTIS NQGFRWGGRM
DTQIQFDKGW VLQANLGYRG KDIALQGYRI GFAQYSLGAR KSFTNKRGSV GLVAENFLTQ
GMGFTSVLNS AQFNQDFRQY IYNSSVRATF SYKFGSLNGA RVKKSKSLSE EN
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