Gene Slin_6734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6734 
Symbol 
ID8716000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp96250 
End bp97266 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391489 
Protein GI284005669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.745861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TATGGATTTC TGCCGTATAC CTGTCGCTAA CAGGCTCTCT CTTCGCCCAG 
TCGGCGAATT ATCATCTCGT CAAAAAAACG ACCATCGGTG GTGAAGGGGG CTGGGATTAC
CTAATGGCCG ATTCGGATGG TGGTCGTCTC TACGTTTCGC ACGGTACGCA GGTGGACGTA
CTCGACCTGA AAAGCCACGA AAAACTGGGA GTTATCACCC CAACACCAGG TGTTCACGGT
ATCGCTGTTG TGCCCGGTAC CTCTATCGGT TACACGACGA ATGGCCGCCC GAACACGGCG
ACGATGTTTA ACGCGAAGAC CTTTAAAGCC ATAAAGGAAA TCCCGACGGG CAAAAAGCCG
GACGCGATTA TGTACGACGC TTTTTCCAAG CGGGTCTTTA TCTTTAACAA CGAAGGCAAT
AGCGCAACAG TGCTGGATGC AACTACTGGC AATGTGGCGG GTACGGTCGA ATTGGGCGGT
GCGCCCGAAG CGGCCGTCAG CGATGACCAT GGGACGATTT TCGTCAATCT GGAAGATAAA
AATGAGGTAG CTGTTTTTGA TGCCAAATCG CTAACGGTCA AACATCACTG GAAGTTAGGA
AAAGGCGAAG AACCCACTGG CCTGGCGTTT GACAAACCGC ATCACCGGTT GTTCAGCACC
TGCCATAAGG TCATGGTGGT AATGGATTCG CAAACGGGTA AGGTGCTGGC GGAAGTCCCA
ACGGGAAGCG GAACCGATGG AGCCGTATTT GACTCCTCAA CCGGCTCGGC CATAAGCTCC
AACGGGGAAG GCACGTTAAC AATCGTAAAG GAAGTAAAAC CGGGACAATT TGACGCGGTT
CAAACCGTAA CGACTCAACG GGGTGCCCGA ACGGTTACTA TCGATCCTAA ATCTCATCAT
ATTTTTGTCA CAACAGCTGA GTACGGCCCT GCCCCAGCCC CTACGACTGA AATTCCAAAG
CCCCGTCCCG TAGTGAAGCC GGGAACGTTC ATGGTGCTGG AATACGCAGC TAAGTAG
 
Protein sequence
MKALWISAVY LSLTGSLFAQ SANYHLVKKT TIGGEGGWDY LMADSDGGRL YVSHGTQVDV 
LDLKSHEKLG VITPTPGVHG IAVVPGTSIG YTTNGRPNTA TMFNAKTFKA IKEIPTGKKP
DAIMYDAFSK RVFIFNNEGN SATVLDATTG NVAGTVELGG APEAAVSDDH GTIFVNLEDK
NEVAVFDAKS LTVKHHWKLG KGEEPTGLAF DKPHHRLFST CHKVMVVMDS QTGKVLAEVP
TGSGTDGAVF DSSTGSAISS NGEGTLTIVK EVKPGQFDAV QTVTTQRGAR TVTIDPKSHH
IFVTTAEYGP APAPTTEIPK PRPVVKPGTF MVLEYAAK