Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6683 |
Symbol | |
ID | 8715949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 43455 |
End bp | 46355 |
Gene Length | 2901 bp |
Protein Length | 966 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | UvrD/REP helicase |
Protein accession | YP_003391438 |
Protein GI | 284005618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0759039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.87543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGTTT CATCTAGTGT AGCAAACCCT GCACAACTTC AGGCTATTGA AGCAACTGAA GGACCATTAC TCATTATTGC TGGTCCAGGT TCGGGGAAAA CAAAAACGCT GGTTGATCGA ATTGTACGAT TGATACAGCT GGGTACTCCG GCCGAAAATC TGTTTGTGGC CACGTTTACG GAGAAGGCCG CCAAAGAGCT GGTTACCCGT GTATCTAATC AACTTCTTAG GTCTGGTCTT CGGGTAAATC TCAATGAGAT GTATCTGGGT ACATTGCACT CCTTGTTTCT ACGTCTGCTT GAGGAGTACC GCGAATACAC CCGCTTAAAA CGGAGTTACC GGATTCTGGA TGACTTCGAC CAGCAGTTTG TGCTCTACCG AAACATCAAT CGATTTATGG AGATTGATGA CATTGAGGTG CTGGTTGGTG AACCGACACG GCCGCGCTGG GAGCGGGCGT CTGATCTGGT ACGACTTTTA AACAGAGTAT CAGAAGAGTA CCTGGACCCT ATCGTTCTGG CCAGCTCAAC GGATATTCCC GTTCGGGTTC TTGGAGAAGC CTATTCGATT TATCGTGAGA TCTTACTGGA AGAAAACGTA CTGGACTTTT CAGTGATACA AACCGAGTTC TTATACCTGC TCGAAAATCA GCCGCAAATT CTTGACAAGC TTCAGGAGAA ATTTCGCTAC CTGATGATTG ACGAGTATCA AGACACCAAT ACCATTCAGG AGCGTATAAT CCTTTTGCTG ACAGGACCTC GACACAATTT ATGCGTGGTG GGCGACGACG ACCAGGGCCT TTACCGATTC CGGGGCGCAT CGATTCGGAA CATCCTTGAG TTCCCCGATC ACTTCCCGGC TGAGAAGTGT ACCGTTATCC GGCTTGAAAC AAACTACCGC TCCCATCCAG ACATCATCAC GTTTTACAAT AACTGGATGA CTCGTATGGA CTGGACCGGG GGCACATCAA CTACGTTTCG GTACGACAAG ACCATTGTAC CTCGTACGGA AAAATTTCAT ACCTCTCCGG CCGTCATTCG GGTAGGGGCA TCAGGCTCGC CCGAACAATA CCATGAAGAA GTGCTGGAGT TCATTCGGTC GTTGCTGGCA TCGGGAAAGA TTACCGATCT GAATCAGATC GCCATGCTGT TCCGGTCGGT AAAAAACGAT CAGGTGCTAG CACTAACGGA GTTTTTGGAA GAAAATGGCG TTCCGGTTTT TTCACCCCGA TCGGCCCTGT TCTTTGAGCG CGACGAGGTA AAGCTAATTC TGGGGGCCCT TATCTTCCTG TTTCCTAACC TCTTTGAGGC TTTGAAATGG CAAGACGACG CACAATTAAG TATTTGGGAT CGCTATCAGG AATGGAAGTT GTTTTTTGCC AATGCACTGC GAGCCGATCC GGCTAAACAC CGTGATCTGA TTCAGTGGGC ACGGCAAACA GCTAAAATTC ATGCGGCCAT GGCAGATTCA ACAACCTATG CCTTTGCGGC CCTGCTTTAT CAGCTACTTG AATTTCCACT TTTCTCTGAG TTTCTGAACG TGAATATGAC AGACCCGAAG CGAGACCTTC GGGCTGCTTA CAACATTGCC CTTCTTTCCA AAATACTGTA TCGCTTTGAG TATCTCTACA ACGTAACAAT CCTGACGCCA AAAAATCAGC AGTCGGTGCT TCAGAATTTC TTCAACCAGT ACCTGCGGTT TGTGTACGAA GGTGGCATTC AGGAATATGA GGACTTTGAT GAAATGGCCC CTTCCGGATG CATATCGTTT ATGACAATTC ACCAGGCAAA AGGGTTGGAG TTTCCCGTTG TTATGGTTGG GTCGTTGAAT GCTGTCCCCC GTACTCAGCG GGAGGCCGTT GACTTAACTC CTTACTTACA CAAAGCCCCG TTTGAACCTG CCGAAGAAAC CCATCGCTTT GACTTTTGGC GACTGTATTA CACCGCTTTT TCCAGACCTC AGAATTTGCT GGTCCTGACA ACCCGGGAGA AACAAGGGCA GGGGCGTAGC CCATCCAAGT ACTTCGATCA GGTACATTAT TCGTTACCCT CTTGGCGCAG TCCGTCGTTC CGATTGGACG ACTTTACGTT TGATTCACTT AAGCCGGTGA ATATTAAGCA TGAGTACTCG TTTACTTCGC ACATTTTGCT GTATGAGAAC TGTCCACTCC AGTATAAATT TTACAAGGAG CTAAAATTTG TTGAAGTACG GACGGGGGGC GTTTTAGGGG GCTCGCTGCT GCACCAGACG ATTGAAGACA TTCACCGGCA CGTACTGCGC GGGGAGCCGC ACAATGAATT GACGGATGAA AAAATAAAAT CTTGGTACGA TCTGAATTAC AACTTACTTG CCAAACAGCA GCGAAGTCAG CTCCGGCAAG CACAACTTGA CGCATTGCTC CGGCAGATTT TGCGGTATCG AGATCGACAA GCTGACAAAT GGCACCTGAT CCGGGAAGCC GAGGTCGACG TATCGCTGGT GAAGGAAGAC TATATCCTGA AAGGTACCAT TGATCTGATC GAAGGAGAAA ACGGAACGGT TGAGTTGGTG GATTTTAAGT CGGGCGATAA GCCGGATGTG AACACAACTG ACCCACGGCT AAGGAGGCAG GTAAACCAGT ACCGAAGGCA GCTGGAGATT TATGCTCATT TGGTTGAAGA GCGAACGGGC CAGACCGTGT CCCGGATGAA TTTATACTAT CCGAAAGAAG AGAGTAGTAG TCCCTATGTG TCATTCCCGT ACAACCGGGA TAATGTGGCC GTTACGGTCA ACTCGTTTGA CGAGGTTGTG AAGAAGATAG GAAATTTTGA TTACGATATG ACACATACAC AGAAGACCGA TAAGTTGTGT GGCGACTGCG ATATGCGGTA TCATTGTAAC CCAAGTAAAT TTTCCCTATA A
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Protein sequence | MLVSSSVANP AQLQAIEATE GPLLIIAGPG SGKTKTLVDR IVRLIQLGTP AENLFVATFT EKAAKELVTR VSNQLLRSGL RVNLNEMYLG TLHSLFLRLL EEYREYTRLK RSYRILDDFD QQFVLYRNIN RFMEIDDIEV LVGEPTRPRW ERASDLVRLL NRVSEEYLDP IVLASSTDIP VRVLGEAYSI YREILLEENV LDFSVIQTEF LYLLENQPQI LDKLQEKFRY LMIDEYQDTN TIQERIILLL TGPRHNLCVV GDDDQGLYRF RGASIRNILE FPDHFPAEKC TVIRLETNYR SHPDIITFYN NWMTRMDWTG GTSTTFRYDK TIVPRTEKFH TSPAVIRVGA SGSPEQYHEE VLEFIRSLLA SGKITDLNQI AMLFRSVKND QVLALTEFLE ENGVPVFSPR SALFFERDEV KLILGALIFL FPNLFEALKW QDDAQLSIWD RYQEWKLFFA NALRADPAKH RDLIQWARQT AKIHAAMADS TTYAFAALLY QLLEFPLFSE FLNVNMTDPK RDLRAAYNIA LLSKILYRFE YLYNVTILTP KNQQSVLQNF FNQYLRFVYE GGIQEYEDFD EMAPSGCISF MTIHQAKGLE FPVVMVGSLN AVPRTQREAV DLTPYLHKAP FEPAEETHRF DFWRLYYTAF SRPQNLLVLT TREKQGQGRS PSKYFDQVHY SLPSWRSPSF RLDDFTFDSL KPVNIKHEYS FTSHILLYEN CPLQYKFYKE LKFVEVRTGG VLGGSLLHQT IEDIHRHVLR GEPHNELTDE KIKSWYDLNY NLLAKQQRSQ LRQAQLDALL RQILRYRDRQ ADKWHLIREA EVDVSLVKED YILKGTIDLI EGENGTVELV DFKSGDKPDV NTTDPRLRRQ VNQYRRQLEI YAHLVEERTG QTVSRMNLYY PKEESSSPYV SFPYNRDNVA VTVNSFDEVV KKIGNFDYDM THTQKTDKLC GDCDMRYHCN PSKFSL
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