Gene Slin_6646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6646 
Symbol 
ID8715913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp6257 
End bp6769 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID 
Productprotein of unknown function DUF305 
Protein accessionYP_003391402 
Protein GI284005582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.350625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.51653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAC ACAATCAACA TACCGACCAG GCTCGGTCAA TGCAGCAGGG CCACACGATG 
GCTGGGCAAA ACCACTACGG CAAATTAGCC ATCATGGGAG TCTTGTCCTT TTTATCAATG
TATACCCTTA TGTACTCGAT GGTGGACCGC TTTGAAAATG TAATTCCGAA CGTCAATCAG
TTGTATATGG CTGGCCTGAT GACAATGCCA ATGCTTATTA TCGAAGTACT ATTAATGTCG
TCCATGTATA CAAACAAACA GCGGAATGTT CTGGTCGTCG CGATTAGTAC CCTAGCATTG
GTCGGCTTTT TTTTCCTCAT TCGTGATCAA ACGGCGGTTG GCGATAAGCA GTTTGCCAAG
TCGATGATTC CGCACCATGC CGCAGCCATT CTGATGGCTA GGGCGGCCAA ACTCAGCGAT
CCCGAACTGC AAAAGTTACA GCAGGATATC ATTTCAGCGC AGGAAAAAGA AATCAGGCAA
ATGAAGGACA AAATCGCTGA ACTGGATAAG TAA
 
Protein sequence
METHNQHTDQ ARSMQQGHTM AGQNHYGKLA IMGVLSFLSM YTLMYSMVDR FENVIPNVNQ 
LYMAGLMTMP MLIIEVLLMS SMYTNKQRNV LVVAISTLAL VGFFFLIRDQ TAVGDKQFAK
SMIPHHAAAI LMARAAKLSD PELQKLQQDI ISAQEKEIRQ MKDKIAELDK