Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6646 |
Symbol | |
ID | 8715913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | + |
Start bp | 6257 |
End bp | 6769 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | protein of unknown function DUF305 |
Protein accession | YP_003391402 |
Protein GI | 284005582 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.350625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.51653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACAC ACAATCAACA TACCGACCAG GCTCGGTCAA TGCAGCAGGG CCACACGATG GCTGGGCAAA ACCACTACGG CAAATTAGCC ATCATGGGAG TCTTGTCCTT TTTATCAATG TATACCCTTA TGTACTCGAT GGTGGACCGC TTTGAAAATG TAATTCCGAA CGTCAATCAG TTGTATATGG CTGGCCTGAT GACAATGCCA ATGCTTATTA TCGAAGTACT ATTAATGTCG TCCATGTATA CAAACAAACA GCGGAATGTT CTGGTCGTCG CGATTAGTAC CCTAGCATTG GTCGGCTTTT TTTTCCTCAT TCGTGATCAA ACGGCGGTTG GCGATAAGCA GTTTGCCAAG TCGATGATTC CGCACCATGC CGCAGCCATT CTGATGGCTA GGGCGGCCAA ACTCAGCGAT CCCGAACTGC AAAAGTTACA GCAGGATATC ATTTCAGCGC AGGAAAAAGA AATCAGGCAA ATGAAGGACA AAATCGCTGA ACTGGATAAG TAA
|
Protein sequence | METHNQHTDQ ARSMQQGHTM AGQNHYGKLA IMGVLSFLSM YTLMYSMVDR FENVIPNVNQ LYMAGLMTMP MLIIEVLLMS SMYTNKQRNV LVVAISTLAL VGFFFLIRDQ TAVGDKQFAK SMIPHHAAAI LMARAAKLSD PELQKLQQDI ISAQEKEIRQ MKDKIAELDK
|
| |