Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6523 |
Symbol | |
ID | 8730309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7915181 |
End bp | 7916755 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ATP synthase F1, alpha subunit |
Protein accession | YP_003391279 |
Protein GI | 284041349 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATCCG TAAGACCCGA CGAGATATCA GCCATCCTGC GCCAGCAACT GGCCGGTACG CAAACCGAGG CTGAACTCGA AGAAGTCGGT ACGGTGCTGC AAATCGGCGA CGGCGTAGCG CGTATCTACG GCCTCTCGAA AGTGCAGGCC GGCGAATTGC TGTCGTTCGA CAATGGGCTT CAGGCCATGG CTCTGAACCT TGAAGAAGAC AACGTTGGAG CTGTATTGCT CGGCGACTAT TCAGAAATCA AAGAAGGGGA CACCGTGAAG CGGACCGACC AGATTGCTTA CGTGAATGTA GGCGATGGCA TTCTGGGCCG TGTGGTAAAC ACCCTTGGTT TGCCTATTGA CGGTTTGGGC CCTATCCAGG GTGAACTGTA CCAAATGCCG CTGGAGCGTA AAGCACCGGG CGTTATCTTC CGTCAGCCGG TAACCGAGCC GCTGCAAACC GGTATCAAGG CTATCGACGC CATGATCCCC ATTGGCCGGG GCCAGCGTGA ATTGATCATT GGTGACCGCC AGACGGGTAA AACTGCCGTG GCTATCGACA CCATCATTAA CCAGAAAGAA TTTTACGACA AAGGTCAGCC TGTATTCTGT ATCTACGTTG CCTGCGGTCA GAAAGCCTCT ACCGTGAAGC AGGTTGAGCA GACGCTGCGC AAAGCTGGTG CCATGGATTA CACCGTAATC GTAGCCGCCA ACGCATCTGA CCCATCGCCG ATGCAGTTCT TTGCGCCGTT TACCGGTGCC GCTATCGGTG AGTTCTTCCG TGATACAGGC CGTCCGGCAC TGGTTGTTTA CGACGATCTG TCGAAACAGG CCGTTGCCTA CCGCGAAGTG TCGCTGCTGC TGCGTCGCCC ACCAGGACGT GAAGCGTATC CTGGAGACGT GTTTTACCTG CACAGCCGTT TGCTGGAGCG GGCCGCTAAA ATCAACGCCA ACGACGACAT CGCCAAAACG ATGAACGACC TGCCGCCCAG TCTGAAAGAC CGCGTGAAAG GTGGTGGTTC GCTGACGGCG CTTCCAATTA TCGAAACTCA GGCTGGTGAC GTATCGGCGT ACATCCCGAC GAACGTAATC TCGATTACGG ATGGCCAGAT CTTCCTGGAG TCGAACCTGT TCAACTCGGG TATCCGTCCG GCCATTAACG TAGGTATCTC GGTATCGCGG GTGGGTGGTA ACGCCCAAAT CAAGTCGATG AAGAAAGTAG CCGGTACGCT GAAACTGGAT CAGGCCCAGT TCCGCGAGCT GGAAGCCTTC GCTAAGTTCG GCTCTGACCT TGACGCATCG ACCAAACTGA CGATCGAACG GGGCCGTCGG AACCAGGAGA TGCTGAAACA GCCTCAGTAC TCGCCGGTGC CGGTTGAGCA GCAGGTGGCT ATCATCTATG CATCGACCAA CGGTCTGCTA GACAAAGTGC CGGTTAACAA AGTGAAAGAA TTTGAAACCG AGTTCGGTAT GGTTCTGAGT GCCCAGCACC CAACTGTTCT GAACGACCTT CGCGCCGGTA AACTGACCGA CGAAGCAACG GCAACCCTGA AGAGAGTAGC GGCTGACCTG TCTGCAAATT ATTAG
|
Protein sequence | MESVRPDEIS AILRQQLAGT QTEAELEEVG TVLQIGDGVA RIYGLSKVQA GELLSFDNGL QAMALNLEED NVGAVLLGDY SEIKEGDTVK RTDQIAYVNV GDGILGRVVN TLGLPIDGLG PIQGELYQMP LERKAPGVIF RQPVTEPLQT GIKAIDAMIP IGRGQRELII GDRQTGKTAV AIDTIINQKE FYDKGQPVFC IYVACGQKAS TVKQVEQTLR KAGAMDYTVI VAANASDPSP MQFFAPFTGA AIGEFFRDTG RPALVVYDDL SKQAVAYREV SLLLRRPPGR EAYPGDVFYL HSRLLERAAK INANDDIAKT MNDLPPSLKD RVKGGGSLTA LPIIETQAGD VSAYIPTNVI SITDGQIFLE SNLFNSGIRP AINVGISVSR VGGNAQIKSM KKVAGTLKLD QAQFRELEAF AKFGSDLDAS TKLTIERGRR NQEMLKQPQY SPVPVEQQVA IIYASTNGLL DKVPVNKVKE FETEFGMVLS AQHPTVLNDL RAGKLTDEAT ATLKRVAADL SANY
|
| |