| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6443 |
|---|
| Symbol | |
|---|
| ID | 8730227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7813260 |
|---|
| End bp | 7813868 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003391199 |
|---|
| Protein GI | 284041269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTCA GCGAACGGAA AGCACGCGAG AAAGAAGAAC TACGGAACCT GATTCTGGAA
GGAGCCATGA AGCTCTTTGC CGAAAAGGGC GTAGCTAACG TGACGATCCG GAACATTGCC
GATGCCGTGG AGTACAGCGT CGGGACGGTG TATGTCTATT TCAAAGATAA AAACGCTATT
CTGCACGCCC TTCACACCAA GGGATTTCTG GAGCTGCGCG ACCGGTTTCT GGTCCTGCTG
AACGTGGCAA ATCCGATGGA ACGGCTAAAA GCTGCGGGTA AAGTGTATAT TCAATTTGCT
CAGGAGCAGT CTGATATGTA CGATCTGATG TTCAATACAC AGGCTCCGAT GGATTTCGTA
AAAGAAGGCG ATGGTGATGT GTGGAACGAA GGGAAAGCAA CCTTTGGCTT CCTGCGGACC
ATGATTCAGG ACTGTCAGGC AGCTGGGCAT TTTGACGGGC ATGACCCCGA AGCTCTATCC
TTTCTGATCT GGAGTATCGT GCATGGGATG TGTAGCCTGA GAATCTCGTG CCGTACCGAC
GTGGTTAATC TCGAACAGCC CACCACGCAG GGTTACGCCG AATTTTTGCG AATGCTGGAT
AAGTTTTAA
|
|---|
| Protein sequence | MGVSERKARE KEELRNLILE GAMKLFAEKG VANVTIRNIA DAVEYSVGTV YVYFKDKNAI
LHALHTKGFL ELRDRFLVLL NVANPMERLK AAGKVYIQFA QEQSDMYDLM FNTQAPMDFV
KEGDGDVWNE GKATFGFLRT MIQDCQAAGH FDGHDPEALS FLIWSIVHGM CSLRISCRTD
VVNLEQPTTQ GYAEFLRMLD KF
|
|---|
| |