Gene Slin_6391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6391 
Symbol 
ID8730175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7745914 
End bp7746768 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content51% 
IMG OID 
Productband 7 protein 
Protein accessionYP_003391148 
Protein GI284041218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.163911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA AACCGCTTAC CTCTATCTCT GGTTATGTGT TGTTGCTTGT TGCTGTAGGC 
TGCCTTATTG CAGCCGCAGG TTTAGGAATC GCCCTGAAGA GTGTGGTGAT TCCCGTGCTG
TTAGTCTTAC TGGCTATTAT CCTGTTCATG GGGATAACCG TAATCAATCC GAACGAAGCG
GTGGTTTGTA CGTTCTTCGG GGATTATGTC GGAACAATGA AACAGGGCGG TCTGCGGTGG
GTTAACCCGC TGTACAGTAA GACTAAAATT AGCTTGCGGG CCCGGAACCT GAACGGACAA
ACACTGAAGG TCAATGACAA AATGGGAAAT CCCGTTGAAA TTGCCGCTGT TGTTGTCTGG
CAGGTGAAAG ACACCGCCCG AGCGCTCTTC GATGTGGATA ACTATGTGAA TTTTGTGCAA
GTTCAGTCTG AAGCAGCCGT ACGGAAGTTG GCCAATTCGT ACGCCTATGA TCACATGGAA
GACGAAACCT CATCGGTAAC GTTACGCGAC AGCACCGGCC AGATCAACGT GTTTCTGGAG
CAGGAGCTGA ACGAACGGCT GGAGCGGGCT GGTGTCGACA TTATCGAGGC CCGGGTTAGT
CATCTGGCTT ATTCTTCCGA AATTGCCGGA GCTATGTTAC AACGTCAGCA GGCTTCAGCC
ATGATTGCTG CCCGCCGACT GATTGTTGAA GGGGCCGTGG GCATGGTCGA AATGGCCCTG
GAACGTCTTG AAAAGAACGG GGTAGTTGCG CTGGATGAAG AGCGCAAAGC GGCCATGGTG
AGTAACCTGC TGGTGGTACT CTGTGGCGAA AAATCAGTTA GCCCGGTTGT TAACGCCGGG
ACATTGTATA ATTAA
 
Protein sequence
MQEKPLTSIS GYVLLLVAVG CLIAAAGLGI ALKSVVIPVL LVLLAIILFM GITVINPNEA 
VVCTFFGDYV GTMKQGGLRW VNPLYSKTKI SLRARNLNGQ TLKVNDKMGN PVEIAAVVVW
QVKDTARALF DVDNYVNFVQ VQSEAAVRKL ANSYAYDHME DETSSVTLRD STGQINVFLE
QELNERLERA GVDIIEARVS HLAYSSEIAG AMLQRQQASA MIAARRLIVE GAVGMVEMAL
ERLEKNGVVA LDEERKAAMV SNLLVVLCGE KSVSPVVNAG TLYN