Gene Slin_6336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6336 
Symbol 
ID8730120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7684719 
End bp7686107 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391094 
Protein GI284041164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.515423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT TTATTGCCCT GTTTTTACTT ATCTATCTGC CCGGCCTCCT GTTGGCGCAA 
CAGCCGTTTT CGGGCGGACG GTTACGTGTG TCGGAGAACA AACGGTATTT AGTTCATCAG
GACGGCACGC CGTTTTTTTG GCTGGGCGAT ACCGCCTGGG AGCTCTTTCA TCGACTCAAC
CGCGAAGAAG CCGACCAATA CCTGAAGCGC CGGGCCGAAC AGGGCTTTAC GGTGGTGCAG
GCGGTGGCGC TGGCCGAGTT CGACGGCCTT AAAGAACCTA ATCCCTATGG CGAAGTGCCG
CTGGTAGATA ATGACCCGGC CAAACCGAAT GAAGCCTATT TCAAGCACGT CGACTATATC
GTTGATAAAG CGGCCCAGTA CGGAATTGTG ATTGCTTTCC TGCCAACCTG GGGTGATAAG
GTCTTTAAAA GTTCATGGGG GCAGGGGCCG GAGATTTTTA ACCCGACCAA TGCAAAGGCC
TATGGGCGTT ACCTGGGCAA TCGCTACAAA AACCGCGAAA ATATTGTCTG GGTACTGGGG
GGCGACCGTC AGCCGCGCGA TGGTTCATCC GATGTTGAAC TCTGGCGGGC TATGGCTACT
GGCATTCAGG AGGCTGTTGG CGGAGCTGAT AAAGCCCTGA TGACGTTTCA CCCACAACCT
AACGGTCTCG ATGGGGGCGC GTCGAAGTGG TTTAAGAACG ATGCCTGGTT CGACTTCAAC
ATGCACCAGA ACGGACACTG TCGCAACAAC ACTATGTACG ACAACATCAC GGTGTCGTAC
AATAATCAGC CCGTAAAGCC CACGATGGAT GCCGAACCGA TCTATGAGGA TCACCCGGTT
TGCTTCAATG CCAAAGACCT GGGCACGTCC AACGCCTATG ACGTGCGGCT GTATGCCTAC
CTGGATTTGT TTGCAGGGGC GCACGGACAT ACCTACGGCT GCCACGACAT CTGGCAGATG
TACAGTGCTC AGCGTCCGGC CGTCAATGGG CCGCATATTT TTTGGCAGGA AGCCCTCGAC
CTGCCCGGTG CCAATCAGAT GAAGCACGTT CGGCGGTTGA TGACAGCCCG CCCTCTGCTG
GCCCGTGTGC CCGATCAGTC AATCGTTGTG GAGGGTAACC TTGGCCCGGC CGAACGCATT
CAGGCCACGC GAGGAACGGA TTATGCCTTT GTCTATTCGG CCGTTGGAAA ACCGTTTACC
GTTAATCCGG GAAAGATTTC GGGCAAAACC ATTACGGCTA CCTGGTTCGA TCCGCGTTCG
GGGAAAACAC AGTCGGCGGG GACCTTCGAT AACCAGAAAC CCATGCAGTT TAAGCCACCT
ACGCAGGGAT ACGGGCAGGA TTGGGTACTG GTACTAGACG ATGCTGCTAA AAACTATGCG
GCTTTGTAG
 
Protein sequence
MKKFIALFLL IYLPGLLLAQ QPFSGGRLRV SENKRYLVHQ DGTPFFWLGD TAWELFHRLN 
REEADQYLKR RAEQGFTVVQ AVALAEFDGL KEPNPYGEVP LVDNDPAKPN EAYFKHVDYI
VDKAAQYGIV IAFLPTWGDK VFKSSWGQGP EIFNPTNAKA YGRYLGNRYK NRENIVWVLG
GDRQPRDGSS DVELWRAMAT GIQEAVGGAD KALMTFHPQP NGLDGGASKW FKNDAWFDFN
MHQNGHCRNN TMYDNITVSY NNQPVKPTMD AEPIYEDHPV CFNAKDLGTS NAYDVRLYAY
LDLFAGAHGH TYGCHDIWQM YSAQRPAVNG PHIFWQEALD LPGANQMKHV RRLMTARPLL
ARVPDQSIVV EGNLGPAERI QATRGTDYAF VYSAVGKPFT VNPGKISGKT ITATWFDPRS
GKTQSAGTFD NQKPMQFKPP TQGYGQDWVL VLDDAAKNYA AL