Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6336 |
Symbol | |
ID | 8730120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7684719 |
End bp | 7686107 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391094 |
Protein GI | 284041164 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.515423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGT TTATTGCCCT GTTTTTACTT ATCTATCTGC CCGGCCTCCT GTTGGCGCAA CAGCCGTTTT CGGGCGGACG GTTACGTGTG TCGGAGAACA AACGGTATTT AGTTCATCAG GACGGCACGC CGTTTTTTTG GCTGGGCGAT ACCGCCTGGG AGCTCTTTCA TCGACTCAAC CGCGAAGAAG CCGACCAATA CCTGAAGCGC CGGGCCGAAC AGGGCTTTAC GGTGGTGCAG GCGGTGGCGC TGGCCGAGTT CGACGGCCTT AAAGAACCTA ATCCCTATGG CGAAGTGCCG CTGGTAGATA ATGACCCGGC CAAACCGAAT GAAGCCTATT TCAAGCACGT CGACTATATC GTTGATAAAG CGGCCCAGTA CGGAATTGTG ATTGCTTTCC TGCCAACCTG GGGTGATAAG GTCTTTAAAA GTTCATGGGG GCAGGGGCCG GAGATTTTTA ACCCGACCAA TGCAAAGGCC TATGGGCGTT ACCTGGGCAA TCGCTACAAA AACCGCGAAA ATATTGTCTG GGTACTGGGG GGCGACCGTC AGCCGCGCGA TGGTTCATCC GATGTTGAAC TCTGGCGGGC TATGGCTACT GGCATTCAGG AGGCTGTTGG CGGAGCTGAT AAAGCCCTGA TGACGTTTCA CCCACAACCT AACGGTCTCG ATGGGGGCGC GTCGAAGTGG TTTAAGAACG ATGCCTGGTT CGACTTCAAC ATGCACCAGA ACGGACACTG TCGCAACAAC ACTATGTACG ACAACATCAC GGTGTCGTAC AATAATCAGC CCGTAAAGCC CACGATGGAT GCCGAACCGA TCTATGAGGA TCACCCGGTT TGCTTCAATG CCAAAGACCT GGGCACGTCC AACGCCTATG ACGTGCGGCT GTATGCCTAC CTGGATTTGT TTGCAGGGGC GCACGGACAT ACCTACGGCT GCCACGACAT CTGGCAGATG TACAGTGCTC AGCGTCCGGC CGTCAATGGG CCGCATATTT TTTGGCAGGA AGCCCTCGAC CTGCCCGGTG CCAATCAGAT GAAGCACGTT CGGCGGTTGA TGACAGCCCG CCCTCTGCTG GCCCGTGTGC CCGATCAGTC AATCGTTGTG GAGGGTAACC TTGGCCCGGC CGAACGCATT CAGGCCACGC GAGGAACGGA TTATGCCTTT GTCTATTCGG CCGTTGGAAA ACCGTTTACC GTTAATCCGG GAAAGATTTC GGGCAAAACC ATTACGGCTA CCTGGTTCGA TCCGCGTTCG GGGAAAACAC AGTCGGCGGG GACCTTCGAT AACCAGAAAC CCATGCAGTT TAAGCCACCT ACGCAGGGAT ACGGGCAGGA TTGGGTACTG GTACTAGACG ATGCTGCTAA AAACTATGCG GCTTTGTAG
|
Protein sequence | MKKFIALFLL IYLPGLLLAQ QPFSGGRLRV SENKRYLVHQ DGTPFFWLGD TAWELFHRLN REEADQYLKR RAEQGFTVVQ AVALAEFDGL KEPNPYGEVP LVDNDPAKPN EAYFKHVDYI VDKAAQYGIV IAFLPTWGDK VFKSSWGQGP EIFNPTNAKA YGRYLGNRYK NRENIVWVLG GDRQPRDGSS DVELWRAMAT GIQEAVGGAD KALMTFHPQP NGLDGGASKW FKNDAWFDFN MHQNGHCRNN TMYDNITVSY NNQPVKPTMD AEPIYEDHPV CFNAKDLGTS NAYDVRLYAY LDLFAGAHGH TYGCHDIWQM YSAQRPAVNG PHIFWQEALD LPGANQMKHV RRLMTARPLL ARVPDQSIVV EGNLGPAERI QATRGTDYAF VYSAVGKPFT VNPGKISGKT ITATWFDPRS GKTQSAGTFD NQKPMQFKPP TQGYGQDWVL VLDDAAKNYA AL
|
| |