| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6197 |
|---|
| Symbol | |
|---|
| ID | 8729980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7509604 |
|---|
| End bp | 7511727 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Alpha-glucuronidase |
|---|
| Protein accession | YP_003390955 |
|---|
| Protein GI | 284041025 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA TACTACTTTG TCTTCTATTA ATCAGCCACT TTGCCTTCTC CGATGACGGT
TATCGCCTTT GGCTGAAATA TGACCTGATT AAAGACGTGC CCAGACGGGA AGCGTATGCC
CGTTCGGCGC AGTTTATTGC CCTCAACGGC AGCAGTCCCA TTCTGAAATC GGCCGCCGAC
GAACTCCAGA TGGGCTTGCA GGGCTTGCTC GGCAAAGCGG TGCCTATTGT TAGTAATGCT
GGGAGCCGGA CGGGGGGGAT CGTGCTGTCG GTGGCGTTTG CGCCTGCTGC CGGGGCGCAA
ACGCTTGTGG CGGATGGTTA CCAACTGACG AGTCGCAAAT CCGGCAACAT TACGATTGCT
GGCAAAACTG ATTCGGGCGT GTTGTATGGC GCGTTTGCCT TACTTCGACA ACTGCAAACG
GGGCAGTCGG TAGAAAACCT GTCGCTGACC AGCAACCCCA AAATTCAGTA TCGGATGCTG
AACCACTGGG ATAATACGAA CGGCACCATC GAACGGGGGT ATGCTGGGGA GTCGCTCTGG
AAATGGTATG AACTGCCTGC CACTGTCGAT CCGCGTTACC GCGATTATGC CCGTGCCAAT
GCCTCGCTGG GCATAAATGG TACGGTGGTG AACAACGTCA ATGCCAGTGC CCGCTTCATG
ACCGCCGAAT ACATCGAAAA GGTAGCGGCT CTGGCGAATG TCTTCCGACC GTACGGCATC
CGAATTTATC TATCCATTTA CTTCCCGGCT CCCAAAACCA TTGGAGGGCT GAAAACCTCT
GATCCACTCG ACCCCGAGGT ACGGAAATGG TGGGCCGATA AAACCAAAGA AATTTATAAG
GCCATTCCGG ATTTCGGCGG CTTTCTGGTT AAAGCTAACT CCGAGGGTGA ACCCGGTCCG
CAGGATTACG GCCGTACCCA CGCCGACGGG GCCAACATGC TGGCCGAAGC GCTCAGGCCA
TACGATGGCA TCGTGATGTG GCGAGCCTTC GTTTATAAAG CCGACCCCAA AGCTGACCGG
TTCAAAGCCG CCCACGAAGA GTTTACACCG TTAGATGGCC AGTTCGACAA GAAGGTGATT
GTGCAGGTAA AGAACGGCCC CATTGATTTT CAGCCGCGTG AGCCCTTCTC ACCCTTGTTC
GGCAATATGC CCAAAACGCC CCTGTCGATA GAGTTTCAGA TTACGCAGGA GTACCTTGGT
TTTGCTACGC ACTGGGTTTA TGAAGCGCCG ATTTTCAAGG AGTGCCTGGA GACCGATACC
TACGTAAAAG GCAAAGGTTC ACCGTCCGGT GAGGCAACAG TGGCCAAAGT GATTGACGGT
AGCCTGCATC AGTACGCCAT GACGGCCATT GCAGGAGTTG CCAACACGGG TACCGACCGT
AACTGGACCG GCAACCCGAT GGCGCAGGCT AACTGGTTCG CTTACGGTCG GCTGGCCTGG
GATCATACCC TGTCTTCGGA AGGGATTGCC GACGAATGGA TAAAAATGAC GCTCACCCAG
GAGCCTAGCG CCGTGAAGAC CATCAAAACT ATAATGATGC GGTCGCGGGA GATTTACGTT
GACTACAACA CGCCGTTGGG GCTGTCACGT CCGTGGTCGG GGGTGCACTT CGCTCCCGAA
CCCTGGCAGG AGAAAAGTGT CCGCCCCGAC TGGACTGCTA TCTACTACCA CCGGGCCGAT
TCCATCGGGC TGGGCTTCGA CCGGACCGCG ACGGGCAGTA ATGCACTGGC GCAATATCGG
CCCGAAGTGC AGAAGCAATG GAACAACCCC GAAACCTGCC CACTGCCGTA TCTGCTTTGG
TTTCATCGTG TGCCCTGGAC CAAGAAACTG AGCACAGGCC GTACCCTCTG GGATGAGCTC
TGCACCCGTT TCTATACCGG TGCCGATTCG GTGGTGTGGA TGCAGAAGCA ATGGGCGCAG
GTGAAACCCG CCATCGATCC GGCTATCTTT ACCGATGTGA CGGGCCGATT GATAACCCAG
CGCAAGGAGG CCATCTGGTG GCGCGACTCG TGGGTATTGT ATCTCCAGAC CTATTCGAAA
CAACCAATCC CGGCCTCACT CCCCAAACCC GGACGGACGC TGGAGGATGT GAAAGCCTTA
TCCGAAATTT ATAAATTACG CTAG
|
|---|
| Protein sequence | MKRILLCLLL ISHFAFSDDG YRLWLKYDLI KDVPRREAYA RSAQFIALNG SSPILKSAAD
ELQMGLQGLL GKAVPIVSNA GSRTGGIVLS VAFAPAAGAQ TLVADGYQLT SRKSGNITIA
GKTDSGVLYG AFALLRQLQT GQSVENLSLT SNPKIQYRML NHWDNTNGTI ERGYAGESLW
KWYELPATVD PRYRDYARAN ASLGINGTVV NNVNASARFM TAEYIEKVAA LANVFRPYGI
RIYLSIYFPA PKTIGGLKTS DPLDPEVRKW WADKTKEIYK AIPDFGGFLV KANSEGEPGP
QDYGRTHADG ANMLAEALRP YDGIVMWRAF VYKADPKADR FKAAHEEFTP LDGQFDKKVI
VQVKNGPIDF QPREPFSPLF GNMPKTPLSI EFQITQEYLG FATHWVYEAP IFKECLETDT
YVKGKGSPSG EATVAKVIDG SLHQYAMTAI AGVANTGTDR NWTGNPMAQA NWFAYGRLAW
DHTLSSEGIA DEWIKMTLTQ EPSAVKTIKT IMMRSREIYV DYNTPLGLSR PWSGVHFAPE
PWQEKSVRPD WTAIYYHRAD SIGLGFDRTA TGSNALAQYR PEVQKQWNNP ETCPLPYLLW
FHRVPWTKKL STGRTLWDEL CTRFYTGADS VVWMQKQWAQ VKPAIDPAIF TDVTGRLITQ
RKEAIWWRDS WVLYLQTYSK QPIPASLPKP GRTLEDVKAL SEIYKLR
|
|---|
| |