Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6137 |
Symbol | |
ID | 8729918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7439931 |
End bp | 7441940 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | blue (type 1) copper domain protein |
Protein accession | YP_003390896 |
Protein GI | 284040966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TACTGACCAT ACCCGGTCTT CTACTGGCTC TTTTCTTTCC CCTTTCGTCT GCCCTGGCCC AGCGCCCGGC TACGAAAGAA GACTATTACC GAATCGTGAC CTTACCGATT CCGGAAACGA TCAAACTCGA AGTGGGTGGT CTGGCTCCGC TGCCCGATGG CCGTCTGGCG GCCTGTACCC GCCGGGGCGA GGTCTGGATC ATCAGCAACC CATACATGCA GGGAAGCCGC GTACCGACCT ACAAAAAGTT TGCGTCGGGT TTGCACGAGC CACTGGGCTT GATGTGGCAC CCAAAAGGGT ACTTCCTTTG CACGCAGCGG GGCGAAGTCA CAAAACTGGT CGATAACGAT GGCGACGACG TAGCCGACGA ATACAGTTCG TTCTACAAAT GGCCCCTGTC GGGCAATTAC CACGAGTACA GCTACGGCCC CGTGCTGCTG CCCGACGGCG ACATGATTAT TACCCTCAAC CTCGACTGGA TCGGGTACGG AGCTAGTCTG GCCAAATGGC GCGGCTGGAT GCTCAAACTG ACCGAAAAGG GCGAAATGAC ACCCTGGGCT ACCGGCCTTC GGTCACCCGC CGGATTTGGT ATTCTGCATG ATGGCAGCAT TTTCTACACC GAAAATCAGG GCGACTGGGT TGGCTCGGGT CGGATGACGA ATCTGACCAA AGGGGCTTTC GCCGGAAATC CCGCCGGTCT GCGCTGGTCG GGGGAGCCGG GTTCGCCTTT ATCACTGAAG CCGGAAGATG TACCCAGCAC GGGCAAACCC ATGTTTGAGG TAGCGAAAAC CGTTAAAGAA CTGAAAGTAC CCGCCGTCTG GTTTCCACAC ACGCTGATGG GTATATCGAC CTCCGACTTC AAGGAAGATA CGACCAAAGG TGCTTTTGGG CCGTTTGCCG GACAACTGTT CGTGGGCGAT CAGGGCCACA GCAAAATTAT GCGGGTGGCG CTTGAAAAAG TTAACGGAGA GTGGCAGGGA GCCTGTTTCC CCTTCCGCGA AGGCTTTCAG TCGGGTATTA TCCGCACCGT TTGGGGTCAG GATGGCTCCA TGTTCGTGGG CATGACAAGC CGGGGTTGGG CCGCCACGGG CAAAGACCCA TATGGTATTC AGCGGCTGGT GTGGACGGGC AAAATGCCGT TCGAGATGAA GACCATTACC TCCAAGCCCG ATGGCTTCGA AGTGACCTTC ACCGCCCCCG TCGACCGGAA AACCGCCGAA AGCTACAGCC TGAACAGTTT CACCTATAAA TACCACAGAA CCTACGGAAG CCCCATCGAA AACGCCCGTC CGGTGCCCAT CCGTGGTATT GTGGTGGCTC CTGATGGGAT GAGTGCCCGC ATCGTGGCCG ACACCGTTCT GCGCGAAGGG TACATTCATG AAGTGAAAGC AGAGGGCGTC CGGTCGGCGT CGGGTATGCC GCTACTGCAC TCAGTTGGCT ATTATACGCT CAATGCCATT GCGCCGGGAG AGAAACTGAC GCTACCCGCC CGCGCCGTTG CCATGGCCAA ACACGACCAT GCCGAGATGA TGGCGACCGA AAAGAAAGCA GCCGCCACCA CCAGCAAGAA CGTGAAATCG GTGAATGCCA AACGGACGGT AGCCATGCCC GCCGACTGGG CTAACGGCCC CGACCAAACC CTCACCGTAG GCACCAAGCC CGGTCTAAAA TTCGATACCG ATAAACTGGA AGTGAAGGCA GGCAGCCGCA TCAAACTCGT CTTTAACAAC AACGACGACA TGCTGCACAA CTTCGTGATC ACGAAGCCCG GCGCGGCCAA TGCCGTTGGT GATGCTGCCC TTCGGCTGAA CCTAAACGGC CCGAAGATGA ACTACGTACC AGCCACGCCC AACGTGCTGT ATCACACAAA TATTTTACAG CCCGAAACCT CCGAGACGAT CTATTTCCAG GCGCCAACCG AGCCGGGCGA TTATCAGTTC GTATGCTCTT TCCCCGGCCA CTCGTCGCTG ATGCAGGGAA CGCTGAAAGT AGTAAAGTAG
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Protein sequence | MKKLLTIPGL LLALFFPLSS ALAQRPATKE DYYRIVTLPI PETIKLEVGG LAPLPDGRLA ACTRRGEVWI ISNPYMQGSR VPTYKKFASG LHEPLGLMWH PKGYFLCTQR GEVTKLVDND GDDVADEYSS FYKWPLSGNY HEYSYGPVLL PDGDMIITLN LDWIGYGASL AKWRGWMLKL TEKGEMTPWA TGLRSPAGFG ILHDGSIFYT ENQGDWVGSG RMTNLTKGAF AGNPAGLRWS GEPGSPLSLK PEDVPSTGKP MFEVAKTVKE LKVPAVWFPH TLMGISTSDF KEDTTKGAFG PFAGQLFVGD QGHSKIMRVA LEKVNGEWQG ACFPFREGFQ SGIIRTVWGQ DGSMFVGMTS RGWAATGKDP YGIQRLVWTG KMPFEMKTIT SKPDGFEVTF TAPVDRKTAE SYSLNSFTYK YHRTYGSPIE NARPVPIRGI VVAPDGMSAR IVADTVLREG YIHEVKAEGV RSASGMPLLH SVGYYTLNAI APGEKLTLPA RAVAMAKHDH AEMMATEKKA AATTSKNVKS VNAKRTVAMP ADWANGPDQT LTVGTKPGLK FDTDKLEVKA GSRIKLVFNN NDDMLHNFVI TKPGAANAVG DAALRLNLNG PKMNYVPATP NVLYHTNILQ PETSETIYFQ APTEPGDYQF VCSFPGHSSL MQGTLKVVK
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